Gene Lcho_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1067 
Symbol 
ID6162565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1138261 
End bp1138869 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID641663821 
Producthypothetical protein 
Protein accessionYP_001790101 
Protein GI171057752 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TGATTCACGC CACCGGTGCG GCACTGCTCG CCACGGCTTC AATGGCTGCG 
CAGGCCGATA CGTTTTCGTT TACCTCCGAG TTCAGTGATC TCACCGGGTT CGCCACCGGA 
ACCAAGGACG CAGCGGTCAC CACCGACACC CTCACCAAGG GCGGCGATTC CTTTGCGCTG 
TTCAACAACG CCAACGACTT CCTGACTTAC ACGTTCTCGA TCGCGTCGGC AACGGACGTC 
GCCATCAAGT TCTGGTCGGG CAGCTCCAAC AAGGACAAGC TGGGCAGCCT GACCGTGTCC 
TGGCTCGATT CGCTGGACGA CGCGGTGACG CTCGCCGGCG GCTCGTCTGT GCTGACGTTC 
TCGCCATCGT TCATCGACGG CGTGGCGCCG AGCCCGGCCG GAGATCTGGC CACCTACAAC 
GCAACAGGCC TCGCAGCGGG CACCTACACG TTCAGGATCG ATTCAAACTC CAACAGAGAT 
TTCCGCGTCG ACACCTTCTC GGCCGTCGGC ACTAATGTCA CCCCGGTCCC TGAACCCGAG 
ACCTACGCGA TGATGCTGGC CGGCCTGGGG GCGATCGGCT ACCTCGGTCG CCGCCGCAAG 
ATGAAATGA
 
Protein sequence
MKTLIHATGA ALLATASMAA QADTFSFTSE FSDLTGFATG TKDAAVTTDT LTKGGDSFAL 
FNNANDFLTY TFSIASATDV AIKFWSGSSN KDKLGSLTVS WLDSLDDAVT LAGGSSVLTF 
SPSFIDGVAP SPAGDLATYN ATGLAAGTYT FRIDSNSNRD FRVDTFSAVG TNVTPVPEPE 
TYAMMLAGLG AIGYLGRRRK MK