Gene Lcho_1033 details

Gene Information

• Locus tag: Lcho_1033
• ID: 6159980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1098901
• End bp: 1100712
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641663783
• Product: phosphoenolpyruvate-protein phosphotransferase
• Protein accession: YP_001790069
• Protein GI: 171057720
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
• TIGRFAM ID: [TIGR01417] phosphoenolpyruvate-protein phosphotransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 64
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCTGC AAGTATTCGG TTTGCCTGTT TCTCGGGGTG TAGCGATCGG GCGCGCGGTG 
CTGGTGGCGT CCAGCCGCAT CGACGTGGCG CATTACTTCA TCGATCCGGT TGACGTTCCG 
GCCGAGATAT CGCGCCTGCG ACTGGCGCGC AAGCAGGTCA GCGGCGAGCT CGAGGATCTC 
AAGCGCGACC TGCCCCCCAA TGCGCAGACC GAGATCCTGG CGCTGCTCGA TGTCCACCTG 
ATGCTGTTGC ACGACGAGGC ACTTGCGGAG GCCACCTGTG CCTGGATCGT CGAGCGGCAC 
TACAACGCCG AGTGGGCGAT GGCCGCGCAG CTCGAAGTGG TCGCGCGCCA GTTCGACGAG 
ATGGAGGACG AATACCTGCG CGAACGCAAG GCCGACCTCG AACAGGTGGC CGAACGCGTG 
CTGCGTGCAC TGGGCGATCC GTCCAACGGT TCGGCAATCA CCGAACGTGT GGGAGCACGC 
GACTTCGGCG GAGAAGATCC GCTCGTGCTG GTCGCCAACG ACATCTCGCC GGCCGACATG 
CTGCAGTTCA AGGGCAGCGT GTTCACCGGG TTCATCACCG ATGTCGGCGG CAAGAACTCG 
CACACGGCCA TCGTCGCCAG AAGCCTCGAT ATCCCGGCGG TCGTGGGCGC CCGAGACGCC 
AGTCGGCTGA TCCGTCAGGA CGACTGGGTG ATCATCGACG GCGATGCGGG CCTGGTGATC 
GTGGAGCCTT CGTCGATCGT GCTCGAGGAG TACCGCTTCC GTCAGCGCCA GATTCAGGTC 
GAGCGCGAGC GCCTGACCCG TTTGCGCCAC AAGCCGGCGG TGACGCTGGA CGGTGAACGG 
GTGGAACTGC TCGCCAACAT CGAGTTGCCT GGCGACGGGG TGGCTGCGCT GGCCGGCGGT 
GCCGAGGGTG TCGGACTGTT CCGCAGCGAG TTCCTGTTCA TGAACCGCGA CGGGGCCTTG 
CCTGACGAGG AGGAGCAATA TCAGGCCTAT CGCGATGCGG TCACCATCAT GCAGGGGCTG 
CCGGTCACGA TACGAACGGT CGACATCGGC TCGGACAAGC CGCTCGATCG CATGTCGGTG 
CACGAGTTGC GGCACGAGCA CACCTTGAAT CCGGCGATGG GCCTGCGGGC GATCCGCTGG 
AGCTTGTCGG ATCCGGCCAT GTTCGAGGTG CAGCTGCGCG CCATCCTCCG TGCGGCCTCG 
CACGGGCCTG TCCGCCTTCT GGTGCCGATG CTGACTCACC TCAGCGAAAT ACGAGCCACC 
TTCGACGCGC TCCGGCGTGT GCGGGCTCAA CTCATGCGCG AAAGCATTCC GCACGGATCG 
GTGGAAATCG GGGCCATGGT CGAGGTGCCC GCGGCGGCAC TCACCATGCC GATCTTCCTG 
CGCTACTTCG ACTTTGTCTC CATCGGCACA AACGATCTGA TCCAGTACAC GCTGGCGATC 
GATCGCGCCG AAGAGGCAGT GGCCCATCTC TACGACCCCT GGCATCCCGC GGTGCTCCGG 
TTGATTGCCG ACACCATCAG TCAGGCTCAC GCTGCAGGCA AGGGCATCTC TGTCTGTGGC 
GAGATGGCGG GCGACATCGA GTTCACCGAG TTGCTCCTTG GTCTGGGGTT GCGTTCTTTC 
AGCATGCACC CGGCGCAGAT CCCTGCCATC AAGCAACGCA TTCTTCGATC GGACAGCAAA 
CGGTTGCGTG CTTATGCGGC AGCTGTGATG TCGTCGGACG AGCCCCGTTC CGTGGGAAAG 
GACGTTTCGG TTGCCGGAGC AAAGGTGGAC GCTGGCGAAC AGGTGCAAAA GACACCTCGA 
GAAGCTGCCT GA 

 

Protein sequence

MSLQVFGLPV SRGVAIGRAV LVASSRIDVA HYFIDPVDVP AEISRLRLAR KQVSGELEDL 
KRDLPPNAQT EILALLDVHL MLLHDEALAE ATCAWIVERH YNAEWAMAAQ LEVVARQFDE 
MEDEYLRERK ADLEQVAERV LRALGDPSNG SAITERVGAR DFGGEDPLVL VANDISPADM 
LQFKGSVFTG FITDVGGKNS HTAIVARSLD IPAVVGARDA SRLIRQDDWV IIDGDAGLVI 
VEPSSIVLEE YRFRQRQIQV ERERLTRLRH KPAVTLDGER VELLANIELP GDGVAALAGG 
AEGVGLFRSE FLFMNRDGAL PDEEEQYQAY RDAVTIMQGL PVTIRTVDIG SDKPLDRMSV 
HELRHEHTLN PAMGLRAIRW SLSDPAMFEV QLRAILRAAS HGPVRLLVPM LTHLSEIRAT 
FDALRRVRAQ LMRESIPHGS VEIGAMVEVP AAALTMPIFL RYFDFVSIGT NDLIQYTLAI 
DRAEEAVAHL YDPWHPAVLR LIADTISQAH AAGKGISVCG EMAGDIEFTE LLLGLGLRSF 
SMHPAQIPAI KQRILRSDSK RLRAYAAAVM SSDEPRSVGK DVSVAGAKVD AGEQVQKTPR 
EAA