Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1021 |
Symbol | |
ID | 6159866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1090482 |
End bp | 1091954 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641663771 |
Product | flagellar hook-length control protein |
Protein accession | YP_001790057 |
Protein GI | 171057708 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCG TCACTGCGTC TTCCCTCAGC GCCGAAACCG CCCGTGCCGA TCGCATGGCC GGCGAGCGCC GTGGCCGCGA CGACGCGCCG GCCGCCGGCA CCGGGACGGG CGGATTTGCC GGCCTGCTGC GTGCCGCCGG TGTGCAGCCA GGCGCGCAGC CTGGCGCCGG CGAAGCGGCA CGGGCGGCGC AGGCCAGCGC CCGGCGCACG AATCAGGCCC CGGATCCGCA GCGTGCTGCG CCGCCCGCGG CCACACCGGC CCCGCCGGCG CGCCCGCCCG GCAGCAGTGC CGAGGCGAAA TCGGCCGAGA CGCGCGCCCG CGCCGATCGC CCGCGTGCCC AGGGGGCCGG TGCGGGTGCG GATTCGGGTG CAACTGCAGG TGCCGACGAC AGCCGCGAGA CCGACGAAAC CCGTGCCCGG GAAACGGCGC CGGAGGAATC CGCACCCGCT GAAGCGGCCC CCTCCGGTGG CGCCACGGTG TCGCACTGGA TGATGCAGCT GGCGGCGCAG CGCCACGGCG GCATCGGCGC GGCGCTCGGG CGCGGTGCCG GGCTGTCGGC GGCCGGCGCC CAGGTGGCCG GTGGTGGCGA CGCCACCGCG GCTGCGGCGG GCGGCGCTGC CGCGGGGCTC AATCTGCCGA GCTGGGCGCG CCCGGAAGAC CCGGGCACGG GGGCCGGCAC CGGCGTCTGG GCCGGTGGCG GCCAGATGCA GGGCGGGCGC CTCGGCGCGC ACGACAACCC GGCCGCCGGC GCCCGATCGG CGGTGCCGCT CGAAGCGGGC GGCGCCGCGG CGACGCCTGA CGCGGGCCCG TCCGCAGCGG TCGGCACCGA CGCCGCGCCC GGATTCGCGA GCCAGCTCGC GGCGCTGGTG GGGGGGGCGC CGCCGCCTGC CGCCGCGGCC GGCCCGGCAC CGGTCGGCGA GGCCTTCGTG CAGACGCCGG TCGGCGCGCC AGGCTTCGGC GACGAGGTGA TGGTGAAGGT GGCGGCCTTC TCGCTCGAGG GCATCCAGGA GGCCCGTCTG GATCTGAATC CGGCCGAGCT GGGCCCGATC CAGGTGCGCA TCGCGCTCGA CGGCAACCAG GCGCGCATCG ATTTCGGCGC CACCGCCGGC AGCACCCGCG AACTGCTCGA ACAGGCGCTG CCGGCGCTTG CCCAGGCCTT GCAGGCCGAC GGCCTGCAGC TGGCCGCCAG CAGCGTGGTC GGCGAGGTGT CCGACACCGA CGCGGCCTTC GGCGGTGCCG GCAACGGCCG TGACGAGGCC GGCGCCGGGG CGGGCCAGGG CGACGCGGGA AGCGGTCGCC CGGGCGGCTG GGGTCAGCAA TCGGAGTCCC GCGCGGCCCA GGCCGGGCGC GGCGTGCTGC CGGCGGGCTC GCCGTTGCAG CCCGGCCGAG GCGGCGACAC GGCGCCGGGC TGGGGCGGAC AGCGCCCTTC GGATGCCCCG TCCGGTCTGC GCGGGCTCGA TCTCTACGCC TGA
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Protein sequence | MNRVTASSLS AETARADRMA GERRGRDDAP AAGTGTGGFA GLLRAAGVQP GAQPGAGEAA RAAQASARRT NQAPDPQRAA PPAATPAPPA RPPGSSAEAK SAETRARADR PRAQGAGAGA DSGATAGADD SRETDETRAR ETAPEESAPA EAAPSGGATV SHWMMQLAAQ RHGGIGAALG RGAGLSAAGA QVAGGGDATA AAAGGAAAGL NLPSWARPED PGTGAGTGVW AGGGQMQGGR LGAHDNPAAG ARSAVPLEAG GAAATPDAGP SAAVGTDAAP GFASQLAALV GGAPPPAAAA GPAPVGEAFV QTPVGAPGFG DEVMVKVAAF SLEGIQEARL DLNPAELGPI QVRIALDGNQ ARIDFGATAG STRELLEQAL PALAQALQAD GLQLAASSVV GEVSDTDAAF GGAGNGRDEA GAGAGQGDAG SGRPGGWGQQ SESRAAQAGR GVLPAGSPLQ PGRGGDTAPG WGGQRPSDAP SGLRGLDLYA
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