Gene Lcho_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0996 
Symbol 
ID6162444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1065631 
End bp1065942 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content69% 
IMG OID641663746 
Productcytochrome c class I 
Protein accessionYP_001790032 
Protein GI171057683 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG TTCGCCCCGC CCTGATGGGC CTGTTCGCCG CCGCCTGCCT GACCACCGGT 
GCAGCCCAGG CCGCCGACGG CCTGACGGTC TACAACCAGA ACTGCGCGAT GTGCCACGTG
CCCGGCCTGG CCAACGCGCC CAAGTTCGGC GACAAGGAGG CCTGGACGCC TCGCGTCAAG
ACCGGCCGCG ACGCCTTGCT GCAGGCGGCG ATCAAGGGCA AGGGCGCGAT GCCGCCCAAG
GGTGGCAACC CCAAGCTGAG CGACGACGAG ATCGGCGCCG CGCTTGATCA CATGCTGGTG
GCGGTGAAGT AA
 
Protein sequence
MTLVRPALMG LFAAACLTTG AAQAADGLTV YNQNCAMCHV PGLANAPKFG DKEAWTPRVK 
TGRDALLQAA IKGKGAMPPK GGNPKLSDDE IGAALDHMLV AVK