Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0970 |
Symbol | |
ID | 6163034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1036060 |
End bp | 1037112 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663721 |
Product | hypothetical protein |
Protein accession | YP_001790007 |
Protein GI | 171057658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTCGCA TCGAATGGTG GCCACACACC ACCGATACGC GCATTGCCAG CTATCGCCTG CGGTGTGCTC AGATCGTCGA GGCCCTGCGC GATCAGGGCC ATGATGTCGG TCTGCACCGG CCCGGCGGGC CTGTGCCCGA CACCCTGGTG CTCTCCAAGC GCTACGACGC CAGGACGCTC GAACAGGCGA CGCAGTACCG AAGCCGATCG GGCACCCGCC TGATTCTCGA TCTTTGCGAC AACCACTTCT TCTTTTCCGC CGATCCCGAC GGAACACTGC AGCAGCGCGC CGATCGCCTC CGAAATGCCT GCCAGCGCGT CGATCAGGTC ATCGTCTGCT CTCGATCGCT TGCTCAGGTC GTCCGACAAG AGGCGCCGAA GGCAGACATC GCCGTCGTTG CCGACGCGGC AGAACCGCCC GATGACTTGT CGTGGCTGGC ACGCCTGCGC GAACCTCGAG CCGAAATCCG CCTGCACCGG TTGCGCCGCT GGCTCGCACA GGCCCGGGTC GATCCGGCCC GTCGGCTGAT CTGGTTCGGC AATCACGGCA GTGCAGGTGT GGACGGTGGC ATGGCAGATC TGTTGACGGT TCGCAGCAGC CTTGAACGGG CAGCCGCCGA GGCGCCGCTG TCGCTGACCG TCGTCAGCAA CAGCGAGACG GCCTATCGGA GCTTGCTGCA CGGCTGGCGT CTGCCGACCG CCTATCTGCC TTGGTCGCAA TCCACCTTCT CCACCGCCTT GCGGCTGCAC AGCGCAGCCA TCATTCCGAT CCAGTCCAAT CCGTTCACGC AGTGCAAGAC CGCGAACCGG GTTCTCACGG CCGGTCTGCA CGGGTTGAAC GTGATTGCCG ACGCGATCCC GAGTTACGAG GACTTCCGTG GCTGCACGGT CCTCGATGAC TGGCCCCACG GCTTGGGCGA CTATCTACAC GACCGATCTC GACGGGAATC GGATCTGAGC GCCGCGCAAG CCTTGACTCG GAACGCCTAC GAGCTGGCAC AGATTGCTGC CGACTGGGCA AAGGCCCTCG GCCTGCAGGA CGCGCGGCGA TAA
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Protein sequence | MSRIEWWPHT TDTRIASYRL RCAQIVEALR DQGHDVGLHR PGGPVPDTLV LSKRYDARTL EQATQYRSRS GTRLILDLCD NHFFFSADPD GTLQQRADRL RNACQRVDQV IVCSRSLAQV VRQEAPKADI AVVADAAEPP DDLSWLARLR EPRAEIRLHR LRRWLAQARV DPARRLIWFG NHGSAGVDGG MADLLTVRSS LERAAAEAPL SLTVVSNSET AYRSLLHGWR LPTAYLPWSQ STFSTALRLH SAAIIPIQSN PFTQCKTANR VLTAGLHGLN VIADAIPSYE DFRGCTVLDD WPHGLGDYLH DRSRRESDLS AAQALTRNAY ELAQIAADWA KALGLQDARR
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