Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0961 |
Symbol | |
ID | 6160506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1026373 |
End bp | 1027497 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663712 |
Product | chorismate mutase |
Protein accession | YP_001789998 |
Protein GI | 171057649 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CCAACCCGTC TCCCGCGCCT GTCGCCGCTG TCGATCCGGC CTTGCTGGCC TTGCGCACGC AGATCGACGC GCTCGACCGC GAGCTGCTGG CGATGCTCAA CCGCCGTGCC GGCCTGGCCC AGCAGGTGGG CGAGATCAAG AAGCACGAGG GTTCGGTGGT GTTCCGCCCC GAGCGCGAGG CGCAGGTGAT CGACGGGCTC AAGGCCGTCA ATCCGGGCCC GCTCAAGAGC GAGAGCGTGG CGCCGATCTG GCGCGAGATC ATGAGCGCCT GCCGCTCGCT CGAGACGCCG ACCCGGGTGG CCTATCTCGG CCCGGCCGGC ACGTTCAGCG AGCAGGCCGC GCTCGGTTTC TTCGGCAGCT CGATCGTGCG GGTGCCGTGC GGCAGCATCG ACGAGGTGTT CCGCGCCACC ACCGCCGGCG CGGCCGATTT CGGCGTGGTG CCGGTCGAGA ATTCGACCGA AGGCGTGGTG GCGCGTTCGC TCGACCTGTT CCTGACCACG CCGCTGTTCA TCATCGGCGA GACCAGCCTG TTCGTGCGCC ACAACCTGCT GCGCAAGCAG GACACGCTGG CCGGCATCAG CGCGGTGTGC GCGCATCCGC AGGCGCTGGC GCAGTGCCAC GGCTGGCTGA GCTACCACCT GCCCGACGTC GAGCGCCGGC CGGTGTCGAG CAACGCCGAA GGCGCCCGCC TGGCCGGCCT CGATCCGAGC CTGGCGGCGA TCGCCAGCGA GCGCGCGGCC AGCGAATGGG GCCTGCACGT GGTGTCGCCG GCGATCCAGG ACGACGCCAA CAACCGCACC CGCTTCGCCA TCGTCACGCA CCCGGAGCGC CATCCGGCGC CGCAGGCCTC GGGCCACGAC TGCACCAGCC TGGTCGTGTC GGTCATCAAC CGCCCGGGCG CCGTGCACGA CATCCTCGTG CCGCTGAAGG TGCACGGCGT GTCGATGAGC CGCTTCGAGT CGCGCCCGGC GCGCTCGGAC CAGTGGGAGT ACTACTTCTA CATCGACGTG CAGGGTCATC CCGAGACGCC GGCCGTGGCC ACCGCGCTGA AGGAACTGCG CAGCGTGTGC GCCTACTTCA AGGTGCTGGG CACCTATCCG ATCGACGTGC ACTGA
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Protein sequence | MSDSNPSPAP VAAVDPALLA LRTQIDALDR ELLAMLNRRA GLAQQVGEIK KHEGSVVFRP EREAQVIDGL KAVNPGPLKS ESVAPIWREI MSACRSLETP TRVAYLGPAG TFSEQAALGF FGSSIVRVPC GSIDEVFRAT TAGAADFGVV PVENSTEGVV ARSLDLFLTT PLFIIGETSL FVRHNLLRKQ DTLAGISAVC AHPQALAQCH GWLSYHLPDV ERRPVSSNAE GARLAGLDPS LAAIASERAA SEWGLHVVSP AIQDDANNRT RFAIVTHPER HPAPQASGHD CTSLVVSVIN RPGAVHDILV PLKVHGVSMS RFESRPARSD QWEYYFYIDV QGHPETPAVA TALKELRSVC AYFKVLGTYP IDVH
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