| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0956 |
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| Symbol | |
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| ID | 6160128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1020556 |
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| End bp | 1021224 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663707 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001789993 |
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| Protein GI | 171057644 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCG GCACCTGGCG GGCGGTGCTG TTCGACCTCG ACGGAACCCT GATCGACAGC
GCCCCCGACC TGGGCGAGGC CGCCAATGAA CTGCGGGCAA CGCGCGGCCT GTCCGCCCTG
CCCTTGTCGG ACTACCGGCC CCTGACCGGC ACCGGCGCGC GTGGCATGGT GGGCGTTGCG
CTGGGCATCG GCCCCGACGA CGTGCACTTC GAGTCGATCC GGGACGAATA TCTCGCGCTC
TACGAGGCCC GCATGACCCG CCTGACGCAG GTGTTCACCG ACATGCGGCC GGTGCTCGAC
CGCCTCGACA CGCTGGGCAT CGCCTGGGGC ATCGTCACCA ACAAGCACAG CCGCTTTGCG
CAACCGGTGG TTGAAGCGGT CGGACTCGCC CATCGCAGCC GCGTTCTGAT CTGTGGCGAC
ACGGCGGCGC GCGCCAAACC GCACCCCGAT CCACTGCTCG AGGCGGCCCG CCAACTCCGG
GTCGAACCAT CGGCTTGCGC CTACGTCGGC GACGACCTGC GCGACGTTCA GGCTGGCCGT
GCCGCCGGCA TGGTCACGGT GGCAGCGGCC TGGGGCTACC TCGGCCTGGG CGAGGCGATC
GCCGACTGGG GCGCCGATCA TTTGATCGAC ACACCCGCCG AGCTCTTGAA ACTGGCCGCG
ATGGCCTAA
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| Protein sequence | MSGGTWRAVL FDLDGTLIDS APDLGEAANE LRATRGLSAL PLSDYRPLTG TGARGMVGVA
LGIGPDDVHF ESIRDEYLAL YEARMTRLTQ VFTDMRPVLD RLDTLGIAWG IVTNKHSRFA
QPVVEAVGLA HRSRVLICGD TAARAKPHPD PLLEAARQLR VEPSACAYVG DDLRDVQAGR
AAGMVTVAAA WGYLGLGEAI ADWGADHLID TPAELLKLAA MA
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