| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0940 |
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| Symbol | |
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| ID | 6160221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1004178 |
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| End bp | 1005299 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663691 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001789977 |
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| Protein GI | 171057628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 120 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA AGCACAGCCC CCACGCCGCC GATCATTGGC CTGCACCCGT GGACAAGACC
TCGCAGACCG ATGACGAAAG GATTGTTGAC GTGGTGCCAT TGCCTCCCCC CGAACACCTG
ATCCGCTTCT TCCCGATCAG CGGAACGCCG GTCGAGACCC TGATCGGCCA GACCCGCCAC
ACCATCCGCG AGATCCTGCA TGGCCGCGAC GACCGCCTGC TGGTGATCAT CGGCCCGTGC
TCGATCCACG ACCCCGCCGC CGCGCTCGAA TACGCCCGCC GCCTGCTGCC GTTGCGCCAG
AAATACGCCG GCACGCTGGA GGTGGTGATG CGCGTGTACT TCGAGAAACC GCGCACCACG
GTCGGCTGGA AGGGCCTGAT CAACGACCCG TACCTCGATG AGAGCTACCG CATCGACGAG
GGCCTGCGCA TCGCGCGTCA GCTGCTGCTC GACATCAACC GCCTGGGCAT GCCCGCCGGC
AGCGAGTTCC TCGACACCAT CAGCCCGCAG TACATCGGCG ATCTGATCGC CTGGGGCGCG
ATCGGCGCGC GCACCACCGA GAGCCAGGTG CACCGCGAAC TGGCCTCGGG CCTGTCGGCG
CCGATCGGCT TCAAGAACGG CACCGACGGC AACATCAAGA TCGCCACCGA TGCGATCCAG
GCTGCCGCCG GCGCGCACCA TTTCCTGTCG GTGCACAAGA ACGGCCAGGT GTCGATCGTC
GAGACCCGCG GCAACAAGGA TTGCCACGTC ATCCTGCGCG GTGGCAAGGC GCCCAACTAC
GACGCCGAGA GTGTCGCCGC CGCCTGCAAG GACCTGGCGG CGGCCAAGCT CGAGCAGCGT
CTGATGGTCG ACTGCAGCCA CGCCAACAGC AGCAAGCAGC ACCAGCGCCA GATCGACGTG
GCCCGCGACA TCGCCGCGCA GATGGCCGGC GGCAGCCGCT CGATCTTCGG CGTGATGGTC
GAGAGCCACC TGGTGGCCGG CGCGCAGAAG TTCAGCCCCG GCAAGGACGA TCCGCGCAAC
CTGGCCTTCG GCCAGAGCAT CACCGACGCC TGCATCGGCT GGGACGACTC GGAGCAGGTA
CTGGAAATCC TGCATCAGGC GGTTCAGGCG CGCCGCGGCT GA
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| Protein sequence | MNAKHSPHAA DHWPAPVDKT SQTDDERIVD VVPLPPPEHL IRFFPISGTP VETLIGQTRH
TIREILHGRD DRLLVIIGPC SIHDPAAALE YARRLLPLRQ KYAGTLEVVM RVYFEKPRTT
VGWKGLINDP YLDESYRIDE GLRIARQLLL DINRLGMPAG SEFLDTISPQ YIGDLIAWGA
IGARTTESQV HRELASGLSA PIGFKNGTDG NIKIATDAIQ AAAGAHHFLS VHKNGQVSIV
ETRGNKDCHV ILRGGKAPNY DAESVAAACK DLAAAKLEQR LMVDCSHANS SKQHQRQIDV
ARDIAAQMAG GSRSIFGVMV ESHLVAGAQK FSPGKDDPRN LAFGQSITDA CIGWDDSEQV
LEILHQAVQA RRG
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