Gene Lcho_0933 details

Gene Information

• Locus tag: Lcho_0933
• ID: 6159778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 997048
• End bp: 997662
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641663683
• Product: glutathione S-transferase domain-containing protein
• Protein accession: YP_001789970
• Protein GI: 171057621
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 125
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGGTGC TTTATTCCGG CACGACCTGC CCGTACTCGC ATCGCTGCCG CTTCGTCCTG 
TTCGAAAAGG GCATGGACTT CGAGATCCGC GACGTCGATC TCTACGCCAA GCCCGAGGAC 
ATCGCGCTGA TGAATCCGTA CAACGAGGTG CCGATCCTCG TCGAGCGGGA ACTGATTCTG 
TATGAATCGC ACATCATCAA CGAGTACATC GACGAGCGTT TCCCGCATCC GCAACTGATG 
CCCGGCGACC CGGTGGCACG TGCTCGCGTG CGCCTGTTCC TCTTCAACTT CGAGAAGGAA 
CTGTTCACGC ACGTCAACCT GCTCGAAGGC CGTGGCGGCG TGAAGGGCAA CGACAAGCAG 
CTCGAGAAAG CCCGTTCGCA GATCCGCGAT CGCCTGACGC AGCTCGCACC GATCTTCCAG 
AAGAACCGCT ACATGCTGGG CGACGACTTC TCGATGCTCG ACGTCGCGAT CGCGCCGCTG 
CTGTGGCGCC TCGACTACTA CGGCATCGAC CTCTCGAAGA ACGCGGCGCC GCTGCTCAAG 
TACGCTGAAC GCATCTTCTC GCGTCCGGCC TACATCGAGG CACTGACGCC GTCCGAGAAG 
GTGATGCGCA AGTAA 

 

Protein sequence

MMVLYSGTTC PYSHRCRFVL FEKGMDFEIR DVDLYAKPED IALMNPYNEV PILVERELIL 
YESHIINEYI DERFPHPQLM PGDPVARARV RLFLFNFEKE LFTHVNLLEG RGGVKGNDKQ 
LEKARSQIRD RLTQLAPIFQ KNRYMLGDDF SMLDVAIAPL LWRLDYYGID LSKNAAPLLK 
YAERIFSRPA YIEALTPSEK VMRK