Gene Lcho_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0914 
Symbol 
ID6160246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp978292 
End bp978792 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID641663664 
Producthypothetical protein 
Protein accessionYP_001789951 
Protein GI171057602 
COG category[S] Function unknown 
COG ID[COG3915] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCC GCCGCCTCTT TCTTGCCTGC GCCGCCGCGC TGGCCCTGCT GCCCGCCGCG 
CATGCGCTCG ACAAGCCTGC GGGCAAGGTC GTGCTGACCG TCACCGGCAA GGTCACCCAG 
ACCAATGCGC CGGCCAAGGC CGAGTTCGAC ATGGCGATGC TGGCGGCGCT GCCGCAGCAC 
AGCTTCACCA CCCTGACGCC CTGGTACAAG GAGCCGCGCA AGTTCACCGG TCCGCTGCTG 
CGGGACGTGC TGGCCGCCGC CGGCGCCAAC GGCAAGGTGA TCAAGGCCGT GGCCCTGAAC 
GACTACAAGG CCGAGCTGCC GGTCGAAGAC ACCCAGAAAT ACGCCGTGGT GCTGGCGCGC 
CTGATGGACG ACAAGCCGAT GCCGGTGCGC GACAAGGGCC CGCTGTTCAT CATCTACCCC 
TTCGACACCG ACGAGACGCT GCGCTCCGAG CGCTACTACA ACCGCTCCGC CTGGCAGCTC 
AAGATCCTCG AGATCGAGTG A
 
Protein sequence
MLVRRLFLAC AAALALLPAA HALDKPAGKV VLTVTGKVTQ TNAPAKAEFD MAMLAALPQH 
SFTTLTPWYK EPRKFTGPLL RDVLAAAGAN GKVIKAVALN DYKAELPVED TQKYAVVLAR 
LMDDKPMPVR DKGPLFIIYP FDTDETLRSE RYYNRSAWQL KILEIE