Gene Lcho_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0905 
Symbol 
ID6162220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp969501 
End bp969854 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID641663655 
Producthypothetical protein 
Protein accessionYP_001789942 
Protein GI171057593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCGC CAGGGAATTG CGCAGTGAGC ACGACCAACA AACCGCGAGA AATCTTCATC 
CAGGGCCTGA CCCGCGACGG CCGCACTTTC CGGCCCAGCG ACTGGGCCGA ACGGCTGGCC
GGCGCGATGT CGTGCTTCCG GCCGAGCGGC TCGGTAGGCG GCATCGGCGC GGCGATCGGC
TACTCGCCGT ATTGCGTGCC GATGGTGATC GGCAAGACCA AGTGCGTGGT CGTCAACGAA
GCCCTGCGCG ACATCGAGCC GATGGCCTGG GATTTCGTCA TGAACTTCGC CCGCGACAAC
GAACTGCAGG TCACCGAAGC CTGCCTGCTG CCCGATCCTG CACCCAAGCG CTGA
 
Protein sequence
MLPPGNCAVS TTNKPREIFI QGLTRDGRTF RPSDWAERLA GAMSCFRPSG SVGGIGAAIG 
YSPYCVPMVI GKTKCVVVNE ALRDIEPMAW DFVMNFARDN ELQVTEACLL PDPAPKR