| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0892 |
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| Symbol | |
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| ID | 6162612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 954895 |
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| End bp | 955968 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663642 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001789929 |
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| Protein GI | 171057580 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC TTGCCCTGAA GAATATCTAC AAGCAATACG GAGATGTGGT GGCCATGAAG
GGCATCAATC TCCAGGTTCA ACCCGAGGAA TTCATCGTCC TCGTCGGCCC CTCCGGTTGT
GGCAAGTCCA CTCTGCTGCG GATGATTGCC GGGCTCGAGG ACATCACCTC GGGTGAGTTG
TACATCGACA ACGAGTTGAT GAACGACGTC GAGGCCGATT CGCGCGGCCT GGCCATGGTG
TTCCAGAGTT ATGCGCTCTA TCCGCACATG ACCGTGGCGG ACAACATGGG CTTCGCGCTG
AAGATGGCCA AGGTGTCCAA GGACGAGCGC CACCAGAAGG TTCTTGCGGC GGCCAAGATC
CTGCAACTCG AGCACTTGCT CGAAAGAACC CCGAAACAGT TGTCAGGTGG TCAGCGCCAA
CGCGTCGCGA TCGGCCGCGC CATCGTGCGT CACCCGAAGA TCTTCCTGTT CGACGAGCCG
CTCTCGAATC TGGACGCCTC GCTGCGCGTG CAGATGCGCA TCGAACTGGC CGAACTGCAC
CGCAAGCTCA AGGCCACGAT GGTCTACGTG ACCCACGACC AGACCGAGGC GATGACGCTG
GCCGACCGCA TCGTCGTGCT GCGCGACGGT GTCATCGAGC AGGTGGGCAC GCCGCTGGAA
CTGTACAACC GGCCCACCAA CACCTTCGTC GCCGGCTTCA TCGGCTCGCC GAAGATGAAC
CTCATCCCGG CCCAGGTGGT CGAGCGCGGC GAGACCGGTG CCCGCGTGCG CATCGGCGAG
GCCACGATGC TTGCGCTGCC GGCCCATGCC GGCCTGACCC AGGGCCGCAG CCTCACGCTG
GGCGTGCGTC CCGAGCGCTT CGTGCTCGAT CCAGCCGGCC CGATCGCAGG TGCGGTCGCG
GTGGTGGAGC ACCTCGGCGG CGAGACCCTC TGCTACGTCG ACATCGGCGC CGCCACGCGC
CTGACGGTCA AGCTGGAGGC CCAGGCCTCG CTCCGTGCAG GCGACACGGT GCGGCTCGGC
CTGGAGGCTG GCGGGGCACT GCTGTTCGAC GCCGACGGCA AGGCCCTGGC CTGA
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| Protein sequence | MTALALKNIY KQYGDVVAMK GINLQVQPEE FIVLVGPSGC GKSTLLRMIA GLEDITSGEL
YIDNELMNDV EADSRGLAMV FQSYALYPHM TVADNMGFAL KMAKVSKDER HQKVLAAAKI
LQLEHLLERT PKQLSGGQRQ RVAIGRAIVR HPKIFLFDEP LSNLDASLRV QMRIELAELH
RKLKATMVYV THDQTEAMTL ADRIVVLRDG VIEQVGTPLE LYNRPTNTFV AGFIGSPKMN
LIPAQVVERG ETGARVRIGE ATMLALPAHA GLTQGRSLTL GVRPERFVLD PAGPIAGAVA
VVEHLGGETL CYVDIGAATR LTVKLEAQAS LRAGDTVRLG LEAGGALLFD ADGKALA
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