| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0891 |
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| Symbol | |
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| ID | 6162611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 954046 |
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| End bp | 954876 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641663641 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001789928 |
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| Protein GI | 171057579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG GTTCAACGCG CGAAAAGCGC GATCCCCTGC GGACCGTCCT CGGCTGGCTC
GTCGGCATCG TCATGTCCTT CCCGGTGTTC TGGATGGCGC TGGCAGCGTT CAAGACGGAA
CAGGATGCAG CCGCCATCCC GCCGAAGTTC CTCTTCGAGC CCACGCTCGA GAACTTCGTT
GCGATGAGCG AGCGGGTGAA CTACTTTCAC CATGCTTGGA ACAGCATCGT GGTGTCGTTC
TCGTCCACGC TGATCGCGAT CGCGCTGGCC GCGCCGGCGG CTTACGTGAT GGCATTCCAC
GCCAACAAGC TCACCCGCAC GCTGATGCTG TGGATGCTGT CAATCCGCTT CATGCCCGCG
GTGGGTGCAC TGATTCCGAT CTATCTCATC CTGGTCGCGC TCGACCTGAT CGACACCCGG
CTCGCGCTGG TAGTGATCAC CTGCCTCAGC AATCTGCCAC TGATCGTGTG GATGCTGTAC
TCCTATTTCA AGGAGGTGCC TGCCGAAATC CTCGAGGCGG CGCGCATGGA TGGTGCCCGG
CCGCTGCGGC AGCTGTGGTA CCTGCTGATT CCTCTGACCT TGCCGGGTAT CGCCTCGACC
GGCCTTCTCG GCATGATCCT GGCGTGGAAC GAGGCCTTCT GGAGCATCAA CATCACGGCA
ACCAATTCCG GAACATTGGC ACTTGCCATC GCATCGTTCG CCAACTCCGA AGGTCAGTTC
TGGGCGAAGT TGTCGGCAGC CTCGCTGGCC TCCATCGCGC CGATCCTGAT CTTCGGCTGG
ATCACGCAAA AACAACTCGT TCGCGGACTC ACCTTCGGTG CAGTGAAATA A
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| Protein sequence | MKPGSTREKR DPLRTVLGWL VGIVMSFPVF WMALAAFKTE QDAAAIPPKF LFEPTLENFV
AMSERVNYFH HAWNSIVVSF SSTLIAIALA APAAYVMAFH ANKLTRTLML WMLSIRFMPA
VGALIPIYLI LVALDLIDTR LALVVITCLS NLPLIVWMLY SYFKEVPAEI LEAARMDGAR
PLRQLWYLLI PLTLPGIAST GLLGMILAWN EAFWSINITA TNSGTLALAI ASFANSEGQF
WAKLSAASLA SIAPILIFGW ITQKQLVRGL TFGAVK
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