Gene Lcho_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0859 
Symbol 
ID6160362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp923077 
End bp923967 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID641663609 
Productperiplasmic component of the Tol biopolymer transport system 
Protein accessionYP_001789896 
Protein GI171057547 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGCA TTCTGACGAT CGAGGAACTG CGCCAGGAGC TGGCGCAACG TGCGTCCGTC 
AGCGTGCTCG AGACGCTGGA TGTCGAGACC GGCGCACGGA CCGTCCTGAA AGAATTCGAC 
GTGGTGATCG AGGCACCGAA CTGGACCCGT GACGGCCGCC GCCTGATCTT CAACAGCCTG 
GGCGGCATGT TTGCCTACGA GTTGTCGAGC GGCGAGGTGA CGCGCATCGA CACCGGCTTT 
GCCGTGGACT GCAACAACGA CCACGTGCTG TCGCCCGATG GCGCCCGACT GGCCATCAGC 
CACTTCGCCC ACGAGGACGT CTCGTCGCGC ATCTACATCG TGCCCTTGGG CGGCGGCGTC 
CCGGTGCGTG TGACCGACCT GGGCCCCAAC TACCTGCACG GCTGGTCACC CGATGGTCAG 
CGCCTGGCTT ATTGCGCCGA GCGTGACGGC CAGTACGACG TCTACACCAT CCCGGTCCAC 
GGTGGACCCG AGACGCGGCT CACGGATACC CCGGGCCTGG ACGACGGTCC GGAATATTCG 
CCCGACGGCC GGCACATCTG GTTCAACTCC ACCCGCAGCG GTCTGATGCA GGTCTGGCGC 
ATGGACATCC ATGGCCGGAA CCAGACGCAT GTCATCAAGG ACGACGCCAA CTGCTGGTTC 
CCGCATGTCT CGCCCGACGG CCAGCGGGTC GTCTACGTGG CCTACGACAA GGACAACGTG 
GCGCCCGGTG ACCATCCGCC CGATAAGCCG GTGGAGATCC GCCTCGTGTC GGCCGAAGGC 
GGCAAGCCCC GGACGATCGC GCAGCTGTTC GGCGGACAGG GCACCCTGAA CGTCAATTCA 
TGGGCGCCTG ACAATCGCCA TATCGCGTTC GTGTCGTATC GACCGGCGTG A
 
Protein sequence
MPGILTIEEL RQELAQRASV SVLETLDVET GARTVLKEFD VVIEAPNWTR DGRRLIFNSL 
GGMFAYELSS GEVTRIDTGF AVDCNNDHVL SPDGARLAIS HFAHEDVSSR IYIVPLGGGV 
PVRVTDLGPN YLHGWSPDGQ RLAYCAERDG QYDVYTIPVH GGPETRLTDT PGLDDGPEYS 
PDGRHIWFNS TRSGLMQVWR MDIHGRNQTH VIKDDANCWF PHVSPDGQRV VYVAYDKDNV 
APGDHPPDKP VEIRLVSAEG GKPRTIAQLF GGQGTLNVNS WAPDNRHIAF VSYRPA