Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0857 |
Symbol | |
ID | 6160416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 921324 |
End bp | 922073 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663607 |
Product | electron transfer flavoprotein alpha/beta-subunit |
Protein accession | YP_001789894 |
Protein GI | 171057545 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCAC TTGTCCCCGT CAAGCGGGTG GTCGACTACA ACGTCAAGGT GCGCGTCAAG AGCGACGGCA CCGGCGTGGA CCTCGCCAAC GTCAAGATGA GCATGAACCC GTTCGACGAG ATCGCCATCG AAGAGGCGGT GCGCTTGAAG GAGAAGGGCG TGCTCACCGA AGTGATCGCC GTCTCCTGCG GGCTCACGCA GTGCCAGGAG ACTCTGCGTA CCGCGCTGGC CATCGGCGCC GATCGCGCCA TCCTGGTCGA GACCGATGCA GAGTTGCAGC CACTGGCCGT GGCCAAGCTG CTCAAGGCGT TGGTCGAGCG CGAGCAGCCG GGCCTGATCA TCCTCGGCAA ACAGGCGATC GACGACGATT GCAACCAGAC CGGCCAGATG CTGGCGGCGC TGGCCAAGCT GCCGCAAGCC ACCTTCGCCT CGAAGGTCGA GGTCGCCGAC GGCAAGGCCA CGGTCACGCG CGAGATCGAC GGTGGCCTGG AGACGTTGAG CCTGACGCTG CCGGCGGTCA TCACGACCGA CCTGCGGTTG AACGAGCCGC GTTATGTCAC GTTGCCCAAC ATCATGAAGG CCAAGAAGAA GCCGCTGGAC AAGGTCACGC CGGCCGACCT GGGCGTGGAC GTGACGCCGC GCCTGAGGAC TCTGAGTGTG GCCGAACCAG CCGGTCGCAA GGCCGGCATC AAGGTGGCCG ACGTGGCCGC GCTGGTCGAC AAGCTGAAGA ACGAAGCCAA GGTGATCTGA
|
Protein sequence | MKALVPVKRV VDYNVKVRVK SDGTGVDLAN VKMSMNPFDE IAIEEAVRLK EKGVLTEVIA VSCGLTQCQE TLRTALAIGA DRAILVETDA ELQPLAVAKL LKALVEREQP GLIILGKQAI DDDCNQTGQM LAALAKLPQA TFASKVEVAD GKATVTREID GGLETLSLTL PAVITTDLRL NEPRYVTLPN IMKAKKKPLD KVTPADLGVD VTPRLRTLSV AEPAGRKAGI KVADVAALVD KLKNEAKVI
|
| |