Gene Lcho_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0857 
Symbol 
ID6160416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp921324 
End bp922073 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID641663607 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001789894 
Protein GI171057545 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TTGTCCCCGT CAAGCGGGTG GTCGACTACA ACGTCAAGGT GCGCGTCAAG 
AGCGACGGCA CCGGCGTGGA CCTCGCCAAC GTCAAGATGA GCATGAACCC GTTCGACGAG
ATCGCCATCG AAGAGGCGGT GCGCTTGAAG GAGAAGGGCG TGCTCACCGA AGTGATCGCC
GTCTCCTGCG GGCTCACGCA GTGCCAGGAG ACTCTGCGTA CCGCGCTGGC CATCGGCGCC
GATCGCGCCA TCCTGGTCGA GACCGATGCA GAGTTGCAGC CACTGGCCGT GGCCAAGCTG
CTCAAGGCGT TGGTCGAGCG CGAGCAGCCG GGCCTGATCA TCCTCGGCAA ACAGGCGATC
GACGACGATT GCAACCAGAC CGGCCAGATG CTGGCGGCGC TGGCCAAGCT GCCGCAAGCC
ACCTTCGCCT CGAAGGTCGA GGTCGCCGAC GGCAAGGCCA CGGTCACGCG CGAGATCGAC
GGTGGCCTGG AGACGTTGAG CCTGACGCTG CCGGCGGTCA TCACGACCGA CCTGCGGTTG
AACGAGCCGC GTTATGTCAC GTTGCCCAAC ATCATGAAGG CCAAGAAGAA GCCGCTGGAC
AAGGTCACGC CGGCCGACCT GGGCGTGGAC GTGACGCCGC GCCTGAGGAC TCTGAGTGTG
GCCGAACCAG CCGGTCGCAA GGCCGGCATC AAGGTGGCCG ACGTGGCCGC GCTGGTCGAC
AAGCTGAAGA ACGAAGCCAA GGTGATCTGA
 
Protein sequence
MKALVPVKRV VDYNVKVRVK SDGTGVDLAN VKMSMNPFDE IAIEEAVRLK EKGVLTEVIA 
VSCGLTQCQE TLRTALAIGA DRAILVETDA ELQPLAVAKL LKALVEREQP GLIILGKQAI
DDDCNQTGQM LAALAKLPQA TFASKVEVAD GKATVTREID GGLETLSLTL PAVITTDLRL
NEPRYVTLPN IMKAKKKPLD KVTPADLGVD VTPRLRTLSV AEPAGRKAGI KVADVAALVD
KLKNEAKVI