Gene Lcho_0850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0850 
Symbol 
ID6160783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp912192 
End bp912551 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content69% 
IMG OID641663600 
Producthypothetical protein 
Protein accessionYP_001789887 
Protein GI171057538 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACA GGTCATTGCG GACCGGCGCG CTGCTGAGCC TGATGGCACT GGGAACGGTG 
GCGCAGGCGG CCCAGGCCGC CGCGCCCTTC GATCTCGGCG AACCGTCGCG CATCGACGCC
GGCAAGCGCC GCTTCGGCAG CACCTGCGCG GCCTACTGCC ACGGTTCGGA GGGGGCCGGT
GGCCGCGCAC CGGCCTTCAA GGGCAACACG CAGCTGACAC CCGAAGACGC CTTCAGGACC
ATCACCGAAG GACGCCGTGG CATCGACATC ATGCCGCCCT GGGGCAGCAC GTTTTCGTCC
GAACAGATCT GGGAGCTGGT GGCCTACATC CAGCACCTGT CGCGCCAGCC GGCGCCCTGA
 
Protein sequence
MRNRSLRTGA LLSLMALGTV AQAAQAAAPF DLGEPSRIDA GKRRFGSTCA AYCHGSEGAG 
GRAPAFKGNT QLTPEDAFRT ITEGRRGIDI MPPWGSTFSS EQIWELVAYI QHLSRQPAP