| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0849 |
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| Symbol | |
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| ID | 6160782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 910587 |
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| End bp | 912173 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663599 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001789886 |
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| Protein GI | 171057537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAT TCAAGTTGAA TGCCCTGCGC CTGGCTGCCC TAGCCACCGT GCTGGGCGCC
AGCCCGCTGA CGGCCGTACA TGCGGCCAAC GGCCTGGCCG AAGACCCGGA GCAGAACGAC
ACCGCCTGGC CGTCCTACAA CCAGGACTAC GCCGGCCAGC GCTACTCGAC GCTCAAGCAG
ATCGACACCA AGAACGTCGA CAAGCTCAAG GAGATCTGCC GCATCGAGCT GTCCGACGGC
GGCTCGCTGC AGAGCGGCCC GATCCTGGTC GATGGCACGA TCTACATCAC GACCGCGCTC
GACACCTTTG CGATCGATCC GACCAGCTGC AAGCAGGTCT GGAAGAACAC GCGCAAGCCG
GTTGCACACA TGCCGTTCGT GGTCAACCGC GGCGCCACCT ACGCCGACGG CATGATCATC
CGCGGCACGC CCGACGGCCA CCTGATCGCG CTCGACGCCA AGACCGGCGC GCAGGTCTGG
GACCACCAGA TCACCGACAC CAGCTACGGC GAATTTGCGT CGGCCGCGCC GCTGGCCTGG
CAGGGCGTGG TCTACATGGG CGTGGCCGGC AGCGACTGGG GCATGCGCGG ACGCGTGCTC
GCCATCGACG CCAAGACCGG CCGCGAGCTG TGGCGCTTCA ACACCATCCC GCGCGGCAAC
GACGTCGGCG CCGAGACCTG GAAGAACAAG TCCTCCGCGC TGATCGGCGG CGGCGGCGTC
TGGGGTGCGT TTTCGCTCGA CGTGCGCGAC GGCGAGCTGT TCGTCAGCGT CGGCAATCCG
GCACAGGACT TTTTGCCCGA CACCCGCCCG GGTGACAACC TCTTCACCAA CTCGCTGGTG
GTGCTGGACG CCCGCACCGG CGGCATCAAG TGGTGGTATC AGGCGGTCAA GAACGACCCC
TGGGATTACG ACCTCGCATC GGCCGCCGTG CTGTACCAGT CGAAGAAGGG TTATCGCGAC
CTGGTCGCCG TCGCCGGCAA GGATGGCTAC ATCCACGGTG TGGATCGCCT GACGCGCAAG
CGCATCTTCA AGACCGCCGT GACGACGCAG TTCAAGCAGG ACAAGGCGCC CACCACGGCC
GGCTCGAAGC ACTGCCCCGG CAACATCGGC GGCGTCGAAT GGAACGGCCC GGCCTACGAC
GTGGCCCAGC ATCAGCTGAC CGTCGGTGCG GTCGACTGGT GCTTCATCTC CACCAAGACC
GGCCCCGACT ACGTGCGCGG CCAGTTGCGC TTCGGCGGCA AGACCACGCC GGTGCCCGGC
GACAAGGCCA GCGGCTGGGT CACCGCGGTC GATGCCGACA CGGGCGCGGT GAAGTGGAAG
CACCACACCG AGGCCCCGGT GGTCGCGGCC GTGACGCCCA CCGCCGGCGG CGTGACCTTT
GCCGGCGACA CCGGCGGCAC CTTCCTGGCG CTGGACAGCG CCTCGGGCAA GGTGCTGATG
AGCAAGAAGA TGGACGGCGC GCTCGGCGGC GGCATCATCA CCTACTCGCA GAAGGGCAGC
CAGTTCGTCG CCATCACCAC GGGCAACATC TCGCGCCTGA CCTTCGGTGG CGACGGCAAT
CCGAGCCTGG TGGTCTTCGG CTTGTGA
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| Protein sequence | MNPFKLNALR LAALATVLGA SPLTAVHAAN GLAEDPEQND TAWPSYNQDY AGQRYSTLKQ
IDTKNVDKLK EICRIELSDG GSLQSGPILV DGTIYITTAL DTFAIDPTSC KQVWKNTRKP
VAHMPFVVNR GATYADGMII RGTPDGHLIA LDAKTGAQVW DHQITDTSYG EFASAAPLAW
QGVVYMGVAG SDWGMRGRVL AIDAKTGREL WRFNTIPRGN DVGAETWKNK SSALIGGGGV
WGAFSLDVRD GELFVSVGNP AQDFLPDTRP GDNLFTNSLV VLDARTGGIK WWYQAVKNDP
WDYDLASAAV LYQSKKGYRD LVAVAGKDGY IHGVDRLTRK RIFKTAVTTQ FKQDKAPTTA
GSKHCPGNIG GVEWNGPAYD VAQHQLTVGA VDWCFISTKT GPDYVRGQLR FGGKTTPVPG
DKASGWVTAV DADTGAVKWK HHTEAPVVAA VTPTAGGVTF AGDTGGTFLA LDSASGKVLM
SKKMDGALGG GIITYSQKGS QFVAITTGNI SRLTFGGDGN PSLVVFGL
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