| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0800 |
|---|
| Symbol | |
|---|
| ID | 6161116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 860209 |
|---|
| End bp | 861195 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641663550 |
|---|
| Product | oxidoreductase FAD-binding subunit |
|---|
| Protein accession | YP_001789837 |
|---|
| Protein GI | 171057488 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCC TGATCCAACC CTTGAACCGC GTCATCCAGG TCGAACCGGG CGCCAATCTG
CTCGAGGCCC TGCAGGCCGC GCAGGTGCCG ATGTCGTACT CGTGCATGGC CGGGCGCTGC
GGCACCTGCC GGTGCAAGAT CCTGGACGGC GAGGTGCTCG ACGGCGCGCG CGAGCAGCAA
CGCCCGCTCG ATGGTGACGA GGGCTACGTG CTCGCTTGCC GCACCTACAT CACCGAACCG
TGCACCATCG AGATCCAGGA GCCCGACGAG ATCGTCGTCC ACCCCGCACG CATCGTCAAA
GCGACGGTGA CCTCGATCAA GGACCTGACG CACGACATCA AGCGCCTGCG GCTCAAGCCG
GCCAAGCCGG TGGCGTTTTC GCCCGGCCAG TACGTGCAGT TGCAGTTCAC GCCCGAACAC
GTGCGGCCCT ATTCGATGGC GGGCGTATGC GATGACGGCG AGTTCGAATT CCACGTGCGA
CTCGTGCCCG ATGGCCGGGT CACCGGCTAC ATCGCCAATG ATCTGAAGCT CGGCGATCCG
GTGCGGGTCA GCGGCCCGCT CGGCTCGGCC TACCTGCGCC GCAAGCACGA GGGGCCGATG
CTGTGCGTCG CCGGCGGCAC CGGGCTTGCG CCGATCCTGT CGATCCTTCG CGGCGCCATC
TCCGACGGCA TGCGCAATCC GATCCACTTG TACTTCGGCG TGCGGTCGCC GCGTGACGTC
TACGGGCTGG ACTGGCTGGC GCATCTGGCG CAGGCGCATC CGGCGCTGAA GGTCCACGTG
GTGGTGAGCT CCGGCGGCGA CCCGGCCACC CAGCGCTGCG GCCTGGTCAC CGAAGCGATC
GAGCAGGACC TCGGCGACCT CACCGATTGG CGCGCTTACC TGTGCGGCTC GCCGCCGATG
GTGGAGTCGA CGATGCTGGT GGCCAGGCGC AAGGGCATCG CCCCCGAGCA CGTCTACGCC
GACGCGTTCT ACACCCAAGG CACCTGA
|
|---|
| Protein sequence | MEVLIQPLNR VIQVEPGANL LEALQAAQVP MSYSCMAGRC GTCRCKILDG EVLDGAREQQ
RPLDGDEGYV LACRTYITEP CTIEIQEPDE IVVHPARIVK ATVTSIKDLT HDIKRLRLKP
AKPVAFSPGQ YVQLQFTPEH VRPYSMAGVC DDGEFEFHVR LVPDGRVTGY IANDLKLGDP
VRVSGPLGSA YLRRKHEGPM LCVAGGTGLA PILSILRGAI SDGMRNPIHL YFGVRSPRDV
YGLDWLAHLA QAHPALKVHV VVSSGGDPAT QRCGLVTEAI EQDLGDLTDW RAYLCGSPPM
VESTMLVARR KGIAPEHVYA DAFYTQGT
|
|---|
| |