Gene Lcho_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0795 
Symbol 
ID6161149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp856330 
End bp856647 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID641663545 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001789832 
Protein GI171057483 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CCAACTGGGT CGACGCACTG TCGGCCGATG ATCTGCCTGC CGACGACGTC 
ATCGGCGTCG TCGTCGCCGG CCGCGACATC GCGGTCTACA CCGTGGGTGA CGAGGTCTAC
GCCACCGACA ACATCTGCAC GCACGGGCAG GCGCGCCTGT GCGACGGCTT CCTCGAAGGC
CACGAGATCG AGTGCCCGCT GCACCAGGGC AAGTTCGACG TGCGTGATGG CAAGCCGACC
TGTGCACCGG TGACCGATGC ATTGCGCAGC TACCCCGTGA AGATCGAGGG TCAGCGCGTG
TACCTGCAGC TCGACTGA
 
Protein sequence
MSNTNWVDAL SADDLPADDV IGVVVAGRDI AVYTVGDEVY ATDNICTHGQ ARLCDGFLEG 
HEIECPLHQG KFDVRDGKPT CAPVTDALRS YPVKIEGQRV YLQLD