| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0794 |
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| Symbol | |
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| ID | 6161148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 855094 |
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| End bp | 856254 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663544 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001789831 |
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| Protein GI | 171057482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTC GCACTGCTCG CTGTGCCGTG ATTGCCACCG CCTGCACCGC CTTCATGGCG
GCTGCAAACG CGGCAACCAT CGGCTTCATG GCCCCATTGT CCGGACCGCA GGCGCTCGTC
GGCCAGGACC AGATCGACGG CTTCATGCTC GCTGTCGAAC AGTTCGGCGG CAAACTCGGC
GGTCAACCGA CCACCGTGCT GAAGGAGGAC GATCAGCTCA AGCCTGAAAT CGGCCAGCAG
ATCGTGCGCA AGCTGATCGA CAAGGACAAG GTCGACGCGA TCGTCGGGCT GTCGTTCTCG
AACGTGCTGA TGGCCAGCCT GCCGCGGCTG GCCGAGTCGG GCGTGGTCGC CATCACCACC
AATGCCGGGC CGTCGCCTCT TGCCGGCGCC CAGTGCAAGG CCAATGTGTT TTCTCTGGCC
TGGCAGAACG ATGGTGCGGC CGAATCGATG GGCAAGTTCG CCCAGGATCG AGGCATCAAG
CGCATCTACC TGATGGCGCC GAACTACCAG GCCGGCAAGG ACATGCTGGC CGGATTCAAG
CGGTTCTACA AGGGAGAGGT CGTCGACGAG GTCTACACGC AGGTCAACCA GCCCGACTAT
TCGGCCGAGC TGGCGCAGCT TCAGGCCGCC AAGCCCGACG CCGTGTTCGT CTTCTACCCG
GGCGGCATGG GCATCAACTT CGTGAAGCAG ATGGGCCAGG CCGGCATGAC CGGCAAGGTG
CCGCTGTACT CCGTCTTCAC GGTCGACGGC ACGACACTGC CGTCACTGCG CGAGGCAGCA
GTCGGGACGA TCAGTGGCGC GATGTATGAC GCAGCCCTCG ACACAGCCGA GAACCGCAAG
TTCGTGGCTG CCTTCGAGAG CAAGTACAAA CGCACGCCCA GTCTGTATGC CGCGACCGGT
TTCGATGCGG CCACGCTGCT GGATGTCGCG TTGCGCAAGG CCGGTGGCGA CAGCAAGAAG
CTCGCCGCGG CGGTGAAGGC CGCCGGAGCC GAGTTCAAGT CCGTGCGGGG TCCGTTCCGC
TTCGGCAAGA ACAACATGCC GATCCAGGAC TACTACGCTT TCGAGACCAC GCGCACCGGC
GGCAAGCTCG CCACCAGGCT GATCGGCACG CCGCTGGCGG CTCACGCCGA TCCGTACGCC
ACGCAGTGCA CGCTGCCCTG A
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| Protein sequence | MTFRTARCAV IATACTAFMA AANAATIGFM APLSGPQALV GQDQIDGFML AVEQFGGKLG
GQPTTVLKED DQLKPEIGQQ IVRKLIDKDK VDAIVGLSFS NVLMASLPRL AESGVVAITT
NAGPSPLAGA QCKANVFSLA WQNDGAAESM GKFAQDRGIK RIYLMAPNYQ AGKDMLAGFK
RFYKGEVVDE VYTQVNQPDY SAELAQLQAA KPDAVFVFYP GGMGINFVKQ MGQAGMTGKV
PLYSVFTVDG TTLPSLREAA VGTISGAMYD AALDTAENRK FVAAFESKYK RTPSLYAATG
FDAATLLDVA LRKAGGDSKK LAAAVKAAGA EFKSVRGPFR FGKNNMPIQD YYAFETTRTG
GKLATRLIGT PLAAHADPYA TQCTLP
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