Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0769 |
Symbol | |
ID | 6163686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 829128 |
End bp | 830108 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641663520 |
Product | integrase family protein |
Protein accession | YP_001789807 |
Protein GI | 171057458 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000875329 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGCCG CCGCCATGCC CTTCAAGTCG CGTGTCGAGC GCTTCTTGGT CGAGCGCCAT GGTCTGGGGT TCTCAGCGCG CGTAGAGGCT TGCACCTTGC GCAGCTTTGC CCGCCATCTT CATGAGATTG GGCATTGCGG ACCATTGACG GTCGAGGTGA TGACCGACTG GGCACGGCGC GACAGCCATG GCAGCACGGA CCCGGTCACG TGGGCGCGAC GCCTGAAGAG GCTGCGCACG TTTGTGCGCT GGCTGCAGCA GTTCGAGCCC GACACCGAAG TTCCCGATGA CACGGTCTTC GGGCGCATGC CGGAGCGCAA GGCGCCCCAC ATCTACAGCG AGCAAGAGAT CATTGACCTG CTGACCAGCG CCAGGCGGCT TGGACCGGCG TCCAGCCTTC GTGGTGTCGT CTTCGAGACG CTGTTCGGGC TGATCGCCTC GACCGGCCTG CGGATCAGCG AAGCGCTGTC GCTGAAGAAC GCTGACGTCG ATCTCAAGAC CGGCATGCTG AGCATCCAGC TGACCAAGTT CGGCAAGTCG CGCCAAGTGC CGGTGCATCC CAGCACCCTT GAGGCGTTGC GTCAATATCG CCTGCGGCGC GACTTGGCGG GCGAGTCTTA CGGCGACGAC ACCGCGTTCT TCGTCGGCAG CCGGGGTCGA CTGCATGGCC GGCCTCTGGG CGACCGCCAG GTGCATCGCG TCTTCGGTGA GTTGCGCCGG CAATTGGGTT GGCCCAATCG CGGATCGCAC CACGCCGCAC GCATCCATGA TCTGAGGCAC ACCTTCGTCG TTCGACGCAT CGTGCAGTGG TACGCCCAGG GCGTGGATAT CGACCAGGCC ATGCTCTCGT TGTCGACATA CATCGGGCAT GCGATGGTGA CCAACACCTA CTGGTACCTC TCGGCGGTGC CGGAACTGAT GGCGCTGGCC GCAGGGCGGT TCGAAGCGTA CATGTCACAA GCGGGGGCAG GCGATGAATA A
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Protein sequence | MSAAAMPFKS RVERFLVERH GLGFSARVEA CTLRSFARHL HEIGHCGPLT VEVMTDWARR DSHGSTDPVT WARRLKRLRT FVRWLQQFEP DTEVPDDTVF GRMPERKAPH IYSEQEIIDL LTSARRLGPA SSLRGVVFET LFGLIASTGL RISEALSLKN ADVDLKTGML SIQLTKFGKS RQVPVHPSTL EALRQYRLRR DLAGESYGDD TAFFVGSRGR LHGRPLGDRQ VHRVFGELRR QLGWPNRGSH HAARIHDLRH TFVVRRIVQW YAQGVDIDQA MLSLSTYIGH AMVTNTYWYL SAVPELMALA AGRFEAYMSQ AGAGDE
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