| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0764 |
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| Symbol | |
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| ID | 6163246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 823160 |
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| End bp | 824128 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663514 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001789802 |
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| Protein GI | 171057453 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000120999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGGACA ATGCGGGCAT GAGCACCTTG CCCCAGCCCT GCATCATCGC CACCCGCGAA
AGCCGCCTCG CCCTCTGGCA GGCCGAACAT GTCCGTGACC TGCTGCAACG CCGCCACGGC
GCGGTGGTCG AGCTGCTCGG CATGACGACC CGCGGCGACC AGATCCTCGA CCGCGCCCTG
TCCAAGGTCG GCGGCAAGGG GCTGTTCGTC AAGGAGCTGG AAGTCGCGCT CGAAGAAGAC
CGCGCCCAGC TCGCCGTGCA TTCGCTCAAG GACGTGCCGA TGGAGCTGCC CGAGGGTTTC
GTGCTGGCCG CCGTGCTGGA GCGCGAAGAC CCGCGCGATG CCTGGGTCTC GAACCACTAC
GACGACGTCG CCAGCCTGCC GCAGGGCGCG CGCGTCGGCA CCTCGAGCCT GCGCCGCATC
GTGCAGCTGA AGGCGGTGCG CCCCGACCTC GAGATCCACG CGCTGCGCGG CAACCTCGAC
ACCCGGCTGC GCAAGCTCGA CGAAGGCCTG TACGACGGCA TCGTGCTGGC CGCGGCCGGG
CTCAAGCGGC TCGGCCTGGC GCAGCGCATC CGTAGCGTCA TCGATCCGGC CGTGATGCTG
CCGGCCGCCG GCCAGGGCGC GCTCGGCATC GAGGTGCGCG CCGATGCGTC GGCGTTGCGC
GAGGCGCTGG CCGCCATGAC CGACGCACCG ACCTGGCTCG CGGTGCATGC CGAACGGGCG
GTCTCGCGTG CACTGGGCGG CAGCTGCAGC ATGCCGCTGG CGGCGTTCGC GCAGTGGCAG
GGCGCGCAGC TTCATCTCGA GGCGCGTCTC GGCCATCCGG AAGACGCCAG CGTGGCGCTG
ATCGTGGCGA GCGCCGAGGC TGCCGTCACC GACACCGCCG GCGCCGAGGC GCTCGGCCTG
GCGGTGGTGG CGCGTCTGCG TGCCGGCGGT GGCGAGGCCT TGCTGGCGGC GCTGCCGGTG
GCGTCCTGA
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| Protein sequence | MRDNAGMSTL PQPCIIATRE SRLALWQAEH VRDLLQRRHG AVVELLGMTT RGDQILDRAL
SKVGGKGLFV KELEVALEED RAQLAVHSLK DVPMELPEGF VLAAVLERED PRDAWVSNHY
DDVASLPQGA RVGTSSLRRI VQLKAVRPDL EIHALRGNLD TRLRKLDEGL YDGIVLAAAG
LKRLGLAQRI RSVIDPAVML PAAGQGALGI EVRADASALR EALAAMTDAP TWLAVHAERA
VSRALGGSCS MPLAAFAQWQ GAQLHLEARL GHPEDASVAL IVASAEAAVT DTAGAEALGL
AVVARLRAGG GEALLAALPV AS
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