Gene Lcho_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0763 
Symbol 
ID6163245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp820188 
End bp823040 
Gene Length2853 bp 
Protein Length950 aa 
Translation table11 
GC content69% 
IMG OID641663513 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_001789801 
Protein GI171057452 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000000509332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAGCG CCGCCTCCCG CCCCCGCAGC CCTGCCGCCA AGAAGTCCGC CGCACGCCGC 
AGCCCTGAAA CCCCGCAACG CCGCAGCGAC GACGCGGCCG AGAAGAACCG GCCGCTGATG
GACGACATCC GTCTGCTCGG TCGCATCCTC GGCGACGTGA TCCGCGAGCA GGAAGGCCAG
GACGCCTTCG ACCTGATCGA GCGGGTGCGC CAGCTCTCGG TGGCCTACCG CTTCAAGCAG
GACGCCAACG CCGGCAAGAC CTTCGACCGG CTGCTCAAGA ACCTGACGGT CGACCAGACC
GTCAGCGTGA TCCGCGCCTT CAGCTACTTC TCGCACCTGG CCAACATCGC CGAAGACCGC
CACCACGTGC GCCGTCGGCA GGTCCACGAG CGCGCCGGCA ACCTGCAGGA AGGCTCGCTG
GCGATGACCT TCGACCGCCT GGCCGAAGCC GACATCCGCG CCGCCGACAT CGCCAAGTCC
CTGGCCCACG CCTACATCTC GCCGGTGCTG ACCGCGCACC CGACCGAGGT GCAGCGCAAG
AGCATCCTCG ACGCCGAGCG CGCCGTGGCC GAGCTGATCG GCGAGCGCGA CGACCTGCAC
ACCGCCGGCC AGCGCGCCGA CAACGAGGCG CTGCTGCGCG CCCGCGTCAC GCAGCTGTGG
CAGACGCGCA TGCTGCGCTA CACCAAGCTC ACGGTGGCCG ACGAGATCGA GAACGCGCTG
AGCTACTACC GCAGCACCTT CCTGCGCCAG ATCCCGCGCA TGTACCGCGC GGTCGAGCAG
GCGCTGCCGG GCCACGACAT CGGCAACTTC TTCCGCATGG GCAACTGGAT CGGCGGCGAC
CGCGACGGCA ATCCGTTCGT GACCGCCGAC ACCCTCAAGC TCGCGCTGTC GCGCCAGAGC
GAGACCGTGC TGCGCCACTA CCTGACCGAG GTGCACGCGC TCGGCGCCGA GCTGTCGATG
TCGCAGATGC TCGCACCCGT CACGCCCGAG ATGCAGGCGC TGGCCGCGGC GTCACCGGAC
CAGAGCTCGC ACCGCGAGGA CGAGCCCTAC CGGCGCGTGC TGATCGGCAT GTACGCGCGC
CTGGCCGCGA CCCTGCACGC CTTCACCGGC ACCGAAGCGC TGCGCCACGC CGTGCCGCCG
CAGAACCCGT ACACCGACGC CGGCCAGCTG CTGGCCGACC TGCAGGTGAT CGAGACCTCG
CTGAAGTTCC ACCACGCGCA GGCGCTGATT GCGCCGCGCC TGGCGCCGCT GATGCGGGCG
GTGCAGGTGT TCGGTTTCCA CCTCGCCACG GTCGACCTGC GCCAGAGCTC CGACAAGCAC
GAAGCGGTGG TGGCCGAGCT GCTGGCCTGC GCACGCGTCG AGGCCGACTA CAGCGCGCTC
GACGAGGGCG CACGCCGCGA ACTGCTGATG CGCCTGCTCA ACGAGACCCG GCCGCTGCGC
GTGATCGGCG CCGAGTATTC GGAGCACACC GTCGGCGAAC TGGCGATCTT CGAGACCGCG
CGCACGATGC TGGCGCAGTA CGGCCGCGCG GCGATCCGCC ACTACATCAT CTCGCACACC
GAGGATGTGT CCGACCTGCT CGAGGTGCTG CTGCTGCAGA AGGAAGCCGG CCTGCTGGTC
GGCGCGCTCG ACGCCGACGC GACCAACGCG CTGATCGTGG TGCCGCTGTT CGAGACCATC
GGCGACCTGC GCAATGCCGC GCCGATCATG CGTGCCTTCT ACGCCCTGCC CGGCATCAAG
CAGATGATCG TGCGCTCGGG TGGCGAGCAG GACATCATGC TGGGCTACAG CGACAGCAAC
AAGGACGGCG GCTTCTTCAC CAGCAACTGG GAGCTCTACG ACGCCGAGCT GGCGCTGGTC
GAGCTGTTCG AGGCCCTGGG CCGCAGCGAC GGCATCACGC TGCGGCTGTT CCACGGCCGC
GGCGGCACCG TCGGCCGCGG CGGCGGCCCG AGCTACCAGG CCATCCTGGC GCAGCCGCCG
GGCACCGTGA ACGGCCAGAT CCGCCTGACC GAACAGGGCG AGGTGATCGC GTCCAAGTAT
TCACACCCCG AGATCGGCCT GCGCAACCTC GAGACGCTGG TCGCGGCCAC GCTCGAAGCG
ACGCTGCTGC ACCCGACGCA GAGCGCGCCG AAGGGCTTTC TCGCGGCGGC GGCCGAGATC
TCCGACGCCA GCATGGCGGC CTACCGCAAG CTGGTCTACG AGACCGACGG TTTCACCGAC
TACTTCTTCA GCACCACGCC GATCCGCGAG ATCGCCGAGC TCAACATCGG CTCGCGCCCG
GCCTCGCGCA AGGCCACCCG CGCGATCGAG GACCTGCGGG CGATCCCCTG GGGCTTCAGC
TGGGGCCAGT GCCGCGTGGC GCTGCCGGGC TGGTGCGGCT TCGGCTCGGC GATCGAGGCC
TTCCTGAGCG CCCAGGGCGA AGACAAGCGC AAGAGCCGGC TGACGCTGCT GCAGCGCATG
TTCAAGCAGT GGCCGTTCTT CCGCACGCTG ATGTCGAATC TGGACATGGT GCTGGCCAAG
ACCGACCTGC GCATCGCCGC GCGTTATGTC GACCTGAGCG AGGACAAGAA GCTCGGCAAG
AAGATCTTCG CGGCGATCGA GGCCGAATGG GCGCTGACCG ATCAGGCGCT GACCCAGATC
ACCGGCGAGA AGAACCGCCT GGCCAGCAAC CCGAGCCTGG CGCGTTCGAT CGAACACCGC
CTGCCCTACC TCGACCCGCT GAACCACCTG CAGGTCGAGC TGATGCGGCG TTATCGCCAG
CGCAAGGAAG GCGACCCGGC CAACGAGCGG CTGCAGCGCG GCATCCACAT CTCGATCAAT
GGCGTGGCGG CGGGACTGCG CAATACTGGC TGA
 
Protein sequence
MPSAASRPRS PAAKKSAARR SPETPQRRSD DAAEKNRPLM DDIRLLGRIL GDVIREQEGQ 
DAFDLIERVR QLSVAYRFKQ DANAGKTFDR LLKNLTVDQT VSVIRAFSYF SHLANIAEDR
HHVRRRQVHE RAGNLQEGSL AMTFDRLAEA DIRAADIAKS LAHAYISPVL TAHPTEVQRK
SILDAERAVA ELIGERDDLH TAGQRADNEA LLRARVTQLW QTRMLRYTKL TVADEIENAL
SYYRSTFLRQ IPRMYRAVEQ ALPGHDIGNF FRMGNWIGGD RDGNPFVTAD TLKLALSRQS
ETVLRHYLTE VHALGAELSM SQMLAPVTPE MQALAAASPD QSSHREDEPY RRVLIGMYAR
LAATLHAFTG TEALRHAVPP QNPYTDAGQL LADLQVIETS LKFHHAQALI APRLAPLMRA
VQVFGFHLAT VDLRQSSDKH EAVVAELLAC ARVEADYSAL DEGARRELLM RLLNETRPLR
VIGAEYSEHT VGELAIFETA RTMLAQYGRA AIRHYIISHT EDVSDLLEVL LLQKEAGLLV
GALDADATNA LIVVPLFETI GDLRNAAPIM RAFYALPGIK QMIVRSGGEQ DIMLGYSDSN
KDGGFFTSNW ELYDAELALV ELFEALGRSD GITLRLFHGR GGTVGRGGGP SYQAILAQPP
GTVNGQIRLT EQGEVIASKY SHPEIGLRNL ETLVAATLEA TLLHPTQSAP KGFLAAAAEI
SDASMAAYRK LVYETDGFTD YFFSTTPIRE IAELNIGSRP ASRKATRAIE DLRAIPWGFS
WGQCRVALPG WCGFGSAIEA FLSAQGEDKR KSRLTLLQRM FKQWPFFRTL MSNLDMVLAK
TDLRIAARYV DLSEDKKLGK KIFAAIEAEW ALTDQALTQI TGEKNRLASN PSLARSIEHR
LPYLDPLNHL QVELMRRYRQ RKEGDPANER LQRGIHISIN GVAAGLRNTG