| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0736 |
|---|
| Symbol | |
|---|
| ID | 6160673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 783595 |
|---|
| End bp | 784890 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641663486 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001789774 |
|---|
| Protein GI | 171057425 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC GCAATCTCTA TCTCAGCATC TACCTCACGG TGGTGGCCGT GCTGCTGGCG
TTCGCGCTGG TGGCCGGGCT GCTGGTGCGC AGCCATGTGG GCGGCGAGCG CGAGCGCATC
GAGTCGGGCA TCAACCGGCG CACGCTGGCG CTGGGCGAGC TGCTGGCCAA CAGCCTGCCC
GAAGCCGGCA CGCCGCTGGC CGAGCAGGCC GCCGCGGTGC AGGACTGGGA GCAGCGCATG
CGGGTGCCGC TGGCGCTCGA CGACAGCGCC GGCCGGCGCA TCGCCGCCTC GCCCGTCTTC
GAGCGTTTGC AGGATGACGG CGAAACGACG GTGCGGATTC CGCTCAGCGA CGGCCGCACG
CTGTGGCTGG CACGCCCGCC GCGGCGGTCG GACGGTTTCG GCCGTCCGCC GCGACCGATC
CTCGACGAGG CCGCCTTGCT GCTGACATTG CTGGCGGCGC TGTTCGTCGC GGTGGCGGCG
GGCTCCTACC CGGTGGTGCG GCGACTCACG CGGCGGCTCG AGGCGCTCAA GCAGGGCGTG
CAGACCTTCG GCGGCGGCGA TCTGGCGCAT CGGCTGGCGG TCGACGGCAA CGACGAGGTG
GCGGCGGTGG CACGCAGCTT CAACCAGGCG GCCCAGCGCA TCGACGACCT GGTGCGGGCC
AACCGCTCGC TGCTGGCCAA CGCCAGCCAC GAGCTGCGCT CGCCGCTGGC GCGGCTGAAG
ATGGCGGTCG AGATGATCGA GGGCGCGGCA CCGGATCGAC GCGCCGACCT CAAGCGCGAG
ATCGATCGGG ACATCCGCGA GCTCGACGCC CTGGTCGAGG AGGTGCTGCT CGCCAGTCGG
CTCGACGCCC AGAGCGAGCT GCAGCGCGAG GCGGTCGACC TGCTCGGCCT GCTGGCCGAG
GAGGGTGCAC GCGTGGGGGC GCTGGTCGAC GGCGCACCGC TGCGCGCCCT GGCCGATGAG
CGCCTGCTGC ACCGGGCGAT GCGCAATCTG CTCGAGAACG CCCGGCGCTA CGGCGGCGGC
GAGATCGAGG CGGACGTGCA GCTCGACGCC ACCGGCGCCG TGGCGATGCG GGTCCGTGAC
CGGGGCCCGG GTGTGCCCGA GGCGCATCGC GAGCGTGTCT TCGAGCCGTT TTTCCGCCTG
CCCGGCCACG CCGAATATGC CGGTGGCGTC GGCTTGGGGC TGTCGCTGGT GCGCCAGATC
GCCGCGCGCC ACGGCGGCAC GGTGCGCTGC GAAGCGCGCG AGGGCGGTGG CAGCTGCTTC
GTGTTGACGC TGCCGGCCGA CGTGGTCGTC AGGTGA
|
|---|
| Protein sequence | MPIRNLYLSI YLTVVAVLLA FALVAGLLVR SHVGGERERI ESGINRRTLA LGELLANSLP
EAGTPLAEQA AAVQDWEQRM RVPLALDDSA GRRIAASPVF ERLQDDGETT VRIPLSDGRT
LWLARPPRRS DGFGRPPRPI LDEAALLLTL LAALFVAVAA GSYPVVRRLT RRLEALKQGV
QTFGGGDLAH RLAVDGNDEV AAVARSFNQA AQRIDDLVRA NRSLLANASH ELRSPLARLK
MAVEMIEGAA PDRRADLKRE IDRDIRELDA LVEEVLLASR LDAQSELQRE AVDLLGLLAE
EGARVGALVD GAPLRALADE RLLHRAMRNL LENARRYGGG EIEADVQLDA TGAVAMRVRD
RGPGVPEAHR ERVFEPFFRL PGHAEYAGGV GLGLSLVRQI AARHGGTVRC EAREGGGSCF
VLTLPADVVV R
|
|---|
| |