Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0726 |
Symbol | |
ID | 6162962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 773502 |
End bp | 774950 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641663476 |
Product | transcriptional regulator |
Protein accession | YP_001789764 |
Protein GI | 171057415 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0919196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCA TGGACAACCC CACCGCCTTG CCGCGCTACC AGCAGCTCGC CGATGACCTC GGCGAGGCCA TGCGGTCCGG CGTGCTGCGC CCGGGCGATC GCCTGCCCTC GGTGCGCGAG ACCTGTCGCG AACGCGGCCT CAGCCCGGCC ACCGTGTTCC ATGCCTACGG ACAGCTGGAG GCCGAGGGCC TGATCGAGGC ACGGCCGCGC TCGGGCTACT TCGTGTGCAC GCCGCGGCGG GCCCTGCGGG CGCCACCGCG AGCCGCACCC GCCTCGTCGA CCGCGCAGCC GGTGGCCGTC AGCGCCCTGG TGTTCGACCT GCTGGGTTCG ACCTCCCGGC CCGGCGTGGT GCCGCTGGGT TCGGCGTTTC CGGCGGCGCA CCTGTTTCCG TTCGAGGCGC TGGCGCGCAG CGGCGCACGC ACCATGCGCA AGCTCGGGCC GGCGCAGATC ACCGGCGCGC TGCTGTCGGG CGACGACGGA CTGCGCCAGG CCCTGCGACG CCGTTACGCG CTGCACGGCG TGGCGCTCGC CGACGACGAA CTCGTCATCA CCAACGGCGC GATGGAGGCG CTCAACCTGT GCCTGCAGGC CGTCACGCAG CCGGGTGACG TGGTGGTGGT CGAGTCGCCC ACCTTCTATG CCGCGCTGCA TGCGCTGGAA CGCCTGCACC TGCAGGCGGT GGAGGTGCGC ACCGATCCGC AAGAGGGGGT CGATCTGGCC GCGCTGGAAG CCCTGCTGGC CGCGCAGCCG GTGGCCGCCT GCTGGTTCAT GCCCAGCTTC CAGAACCCGC TCGGTGCGCT GATGCCCGCC GCGCGCAAGC AGGCGCTGGT CGAACTGCTG GCACGTCACC GCGTGCCACT GATCGAGGAC GACGTGTACG GCGAATTGCA CGCCGGTGCG CGCCGTCCCC TGCCCGCCAA GGCCTTCGAC CGCGACGGTG GCGTGCTGCA TTGCGCGTCG TTCTCCAAAT GCCTGGCGCC GGGCTACCGA GTCGGCTGGG CCGCCGCCGG GCGCTACACC GCCCAGGTGC AGCGGCTCAA GATGATGAGC TCGCTGGCGA CCGCGTTGCC GCCGCAGATG GCCTTGGCCG ACTACCTCGG CCAGGGCGTC TACGACCGGC ACCTGCGCCA GCTGCGGGCA GCGCTGGCCG CACAGCAGCG GCGGGCGCTG CGGCTGATCG AGCGGCACTT CCCCGCCGGC ACGCGCGTGA CGCGGCCCAG CGGCGGCTAC TTCCTGTGGC TCGACCTGCC CGAGGCCGTC GATGGCGTCA CGCTGCACCG GCGCGCGATG GCGCTGTCGA TCAGCACCGC ACCGGGCGTG CTGTTCTCGG CCGATGCGCG CTTTGCGCAC CACCTGCGGC TCAATGTGGG CCACCCGGAC GACCCGCGCG TGGACGCGGC CTTGCGCACG CTGGGCGAGC TGGCCTGCGA GATGGCGGCG GGCCGTTGA
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Protein sequence | MLTMDNPTAL PRYQQLADDL GEAMRSGVLR PGDRLPSVRE TCRERGLSPA TVFHAYGQLE AEGLIEARPR SGYFVCTPRR ALRAPPRAAP ASSTAQPVAV SALVFDLLGS TSRPGVVPLG SAFPAAHLFP FEALARSGAR TMRKLGPAQI TGALLSGDDG LRQALRRRYA LHGVALADDE LVITNGAMEA LNLCLQAVTQ PGDVVVVESP TFYAALHALE RLHLQAVEVR TDPQEGVDLA ALEALLAAQP VAACWFMPSF QNPLGALMPA ARKQALVELL ARHRVPLIED DVYGELHAGA RRPLPAKAFD RDGGVLHCAS FSKCLAPGYR VGWAAAGRYT AQVQRLKMMS SLATALPPQM ALADYLGQGV YDRHLRQLRA ALAAQQRRAL RLIERHFPAG TRVTRPSGGY FLWLDLPEAV DGVTLHRRAM ALSISTAPGV LFSADARFAH HLRLNVGHPD DPRVDAALRT LGELACEMAA GR
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