| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0703 |
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| Symbol | |
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| ID | 6163751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 752008 |
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| End bp | 753381 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663455 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001789743 |
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| Protein GI | 171057394 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.625393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC CGACCCAGCC CGACCTGCCG GACGCAGCCC CGACGGGCCA CAGCGCCGTG
ATCCGGATCG CCAACGCGCC GGTATCAGCA TCGGCACCCG ACACCGCGGC GCTGAACGCC
TCGGTGGCCG ACCGCTACCT GCGCCCCGGC ACGCTGCAAC TGGGCGCACC GCCACCGCTG
TCGCTCTACA TCCACCTGCC GTGGTGCCTG CGCAAGTGCC CGTACTGCGA CTTCAACTCG
CATGAATGGG CCCCCGAGAC GCCTGCGGCA TCGTCACCCC GAGGGGGAGC GTCCGGCTTG
GGGCGGCCCG GCGCCGGACA GGCCCGCGGC GGCATACCCG AAGCGCGTTA CCTCGACGCC
TTGCGCGCCG ACCTCGAAGC CGCGCTGCCG CTGATCTGGG GCCGGCAGAT CCTGTCGATC
TTCATCGGCG GGGGCACACC GAGCCTGTTT TCGCCCGAAG GCATCAACCG CCTGCTGAGC
GACGTGCGCG CGCTGCTGCC GCTGATGCCC GACTGCGAGA TCACGCTCGA AGCCAACCCC
GGCACCTTCG AGCGCGAGCG TTTCCGGGCC TTCCGCGGCG CGGGCGTGAA CCGGCTGTCG
ATCGGCGTGC AGAGCTTCAA CGACGATCAC CTGCGCGCGC TCGGCCGGGT GCACGACCGC
GGCCAGGCGC TGGCCGCCGC CGAAGAAGCC GCCGACGCCT TCGACACCTT CAACCTCGAC
CTGATGTACG CGCTGCCGGG CCAGAGCCTG GCGCAGGCCG GCGAGGACCT GCGCACCGCG
CTGGCGCTGC AGCCACCGCA CCTGTCGGTC TATCACCTGA CGATCGAGCC CAACACGCTG
TTCGCGGTGC GCCCACCGGT GACGCCCGAC GACGACGCGG CCTCCGAGAT GCTCGACCAG
ATCGTCGACC TGACCGGCGC CACAGGGCTC GAACGCTACG AGGTGTCGGC CTTCGCCAAG
CCGGGCCACC GCTGCGCGCA CAACCTCAAC TACTGGCAGT TCGGCGACTA CCTGGGCATC
GGCGCCGGTG CGCACAGCAA GCTGAGCTTT CCGCACCGCG TGCTGCGCCA GGTGCGCTGG
CGCGAGCCGG CGGCCTACAT GACGCAGGCG CTGGCCGGTC AGGCCGTGTC GAACGAAGAA
GAAGTCGGCC GCAAGGCCCT GCCCTTCGAG TTCATGCTCA ACGCGCTGCG CCTGCGCGAG
GGTTTTGCGC TCGAGCTGTT CCGCGAGCGC ACGGGGCTGC CGCTGTCGAG CATCGAAGCG
GCGCTCCAGC AGGCCGAGCA GCGCGGCCTG ATCACGCGCG ACTTTGCGCA GATGCGGCCC
AGCGCGCGCG GTTTCGACTT CCTGAACGAC TTGCAGGAGC TGTTCCTGGC CTGA
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| Protein sequence | MNRPTQPDLP DAAPTGHSAV IRIANAPVSA SAPDTAALNA SVADRYLRPG TLQLGAPPPL
SLYIHLPWCL RKCPYCDFNS HEWAPETPAA SSPRGGASGL GRPGAGQARG GIPEARYLDA
LRADLEAALP LIWGRQILSI FIGGGTPSLF SPEGINRLLS DVRALLPLMP DCEITLEANP
GTFERERFRA FRGAGVNRLS IGVQSFNDDH LRALGRVHDR GQALAAAEEA ADAFDTFNLD
LMYALPGQSL AQAGEDLRTA LALQPPHLSV YHLTIEPNTL FAVRPPVTPD DDAASEMLDQ
IVDLTGATGL ERYEVSAFAK PGHRCAHNLN YWQFGDYLGI GAGAHSKLSF PHRVLRQVRW
REPAAYMTQA LAGQAVSNEE EVGRKALPFE FMLNALRLRE GFALELFRER TGLPLSSIEA
ALQQAEQRGL ITRDFAQMRP SARGFDFLND LQELFLA
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