| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0683 |
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| Symbol | trmD |
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| ID | 6160802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 735328 |
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| End bp | 736077 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663434 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001789723 |
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| Protein GI | 171057374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTCG ATGTCCTGAC CCTTTTTCCC GAGCTGTTCG AGCCTTTCCT GCACGCGGGA
GTGACTCGGC GTGCCTTCGA GAGCGGGCAG GTCGACGTCA AGCTGTGGCA GCTGCGCGAT
TTCGCCGAAG ACAATTACAA GCGGGTCGAC GATCGGCCCT ATGGCGGCGG ACCGGGCATG
GTGATGCTGG TCGAGCCGCT CGAGCGTGCC TTGCGTGCCG TTCGTGCCCA GGCCGGTGAT
GCGGCCCCGC TGATCCACTT CACGCCGGCC GGTGCGCCGA TGACGCAGAA GCGCGTGCGC
GAACTCGCCG CGGGGCCGGG TGCGGTGCTG CTGTGCGGGC GCTACGAAGG CATCGACCAG
CGCTTCATCT CGCGTCATGT CGACGAAGAG ATCAGCCTCG GCGACTTCGT GCTGTCGGGC
GGAGAGCTGC CGGCGCTGGC CTTGCTCGAT GCGGTGACGC GCCTGCAGCC GGGTGTGCTC
AACGATGCCG CGTCGCACCA GCAGGACAGC TTCTCGGACG GTCTGCTCGA TTGCCCGCAC
TACAGCCGCC CCGAGCGGCT GGGTGAGGCC GCCGCCGATG CGGTGCCGGC GGTGCTGCTG
TCGGGCCATC ACGCCCGCGT GGCCAGCTGG CGGCGCGAGC AGCAACTGCG CATCACGGCC
CTGCGCAGGC CCGACCTGAT CGATGCCGCA CGTGCCGCTG GCGCTCTCAG TCCCGCCGAC
GAGCGCTTGC TGGCTTCATT GCAGTTATAA
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| Protein sequence | MRFDVLTLFP ELFEPFLHAG VTRRAFESGQ VDVKLWQLRD FAEDNYKRVD DRPYGGGPGM
VMLVEPLERA LRAVRAQAGD AAPLIHFTPA GAPMTQKRVR ELAAGPGAVL LCGRYEGIDQ
RFISRHVDEE ISLGDFVLSG GELPALALLD AVTRLQPGVL NDAASHQQDS FSDGLLDCPH
YSRPERLGEA AADAVPAVLL SGHHARVASW RREQQLRITA LRRPDLIDAA RAAGALSPAD
ERLLASLQL
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