Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0669 |
Symbol | rpsT |
ID | 6163861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 723858 |
End bp | 724160 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641663420 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001789709 |
Protein GI | 171057360 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCG CTTCCAAAGC CAAGAAAAAG ACGGTTCGCA TTGCGTCGGG CCGCAAGCGC GCCCGCCAGG ACGTCAAGCT CAACGCCGCC AACACCGCGC TGCGCTCGAA GTTCCGCACC GCCGTCAAGG GTGTGCTGAA GGCCGTTGCC ACTGGCGACA AGGCCAAAGC CAGCGACACC TTCAAGTCTG CCCAAAGCGT GATCGACTCG ATCGCCGACA AGGGCATCTT CCACAAGAAC AAGGCCAGCC GTCTGAAGAG CCGCCTGTCT GCCAAGGTCA AAGCCTTGGC TGTCGCGGCC TGA
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Protein sequence | MATASKAKKK TVRIASGRKR ARQDVKLNAA NTALRSKFRT AVKGVLKAVA TGDKAKASDT FKSAQSVIDS IADKGIFHKN KASRLKSRLS AKVKALAVAA
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