Gene Lcho_0656 details

Gene Information

• Locus tag: Lcho_0656
• ID: 6163769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 712032
• End bp: 712568
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641663406
• Product: small GTP-binding protein
• Protein accession: YP_001789696
• Protein GI: 171057347
• COG category: [R] General function prediction only
• COG ID: [COG2229] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 66
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTCATA CAGACCACAA AATCATCTTC ACCGGCCCGG TCGGCGCCGG CAAGACCACC 
GCCATCGCCT CGATCAGCGA CATCGAACCG ATCCGCACCG ATGAACATGC GTCCGACATG 
ACGCAGCGTC GCAAGTCCAA CACCACCGTG GCGATGGACT ACGGGATGAT CCGGCTCGGC 
CCCAAGGAGA AGGTCCACCT GTACGGCACG CCCGGCCAGG AGCGCTTCGA CTTCATGTGG 
GAGATCCTGA CCAAGGGTGG CATCGGCCTG GTGCTGCTGC TCGACAACAC CCGACCGGCG 
CCGTTCGAGG ACATGAAGTT CTACGTCAAC GCGTTCCAGG AGTTCATCGA GAGCACGCGC 
CTGGTGATCG GCGTGACGCA GATGGACACC AACGCCACGC CGACGATCGA CGACTACGTG 
CGCCAGATGA AGGACCTCGA CATCAGCGCC GCGGTCTTCG AAGTGGACGC CCGCCGTCGC 
GACGACGTGT CGTCGCTGAT CCAGGCGCTG CTGCTGTCGA TCGACCCGGT GATCTGA 

 

Protein sequence

MAHTDHKIIF TGPVGAGKTT AIASISDIEP IRTDEHASDM TQRRKSNTTV AMDYGMIRLG 
PKEKVHLYGT PGQERFDFMW EILTKGGIGL VLLLDNTRPA PFEDMKFYVN AFQEFIESTR 
LVIGVTQMDT NATPTIDDYV RQMKDLDISA AVFEVDARRR DDVSSLIQAL LLSIDPVI