| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0621 |
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| Symbol | |
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| ID | 6160185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 669198 |
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| End bp | 670079 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663371 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001789661 |
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| Protein GI | 171057312 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.252794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA AAGGCATCAT CCTCGCCGGA GGCTCCGGCA CCCGGCTGCA CCCGGCCACG
CTGGCGATGA GCAAGCAGCT CCTGCCGGTC TACGACAAGC CGATGGTCTA TTACCCGCTG
AGCACGCTGA TGCTCGCCGG CATCCGCGAC ATCCTGCTGA TCTCCACGCC GCAGGACACG
CCGCGCTTCG AGCACCTGCT CGGCGACGGC AGCCGCTGGG GCCTGAACAT CAGCTACTGC
GTGCAGCCCA GCCCGGACGG CCTGGCGCAG GCCTTCATCC TCGGGCGCGA TTTCGTCGGC
GGCGCCCCCA GCGCGCTGGT GCTCGGCGAC AACATCTATT ACGGCCACGA CCTGCAGGGC
CTGCTGAAAA GTGCTGCCGA CCAGCCCACC GGCGCCAGCG TGTTCGCGTA CCACGTCACC
GACCCCGAGC GCTACGGCGT GGTCGATTTC GACGCACACA AACGCGCCCT CAGCATCGAG
GAAAAGCCCG CCAAGCCCAA GAGCAACTAC GCGGTCACCG GCCTGTACTT CTACGACAAC
CAGGTCTGCG ACATCGCCGC CAGCATCCAG CCCAGCCCGC GCGGCGAGTT GGAGATCACC
GACGTCAACG CCGCCTATCT GAAGCAGGGC CAGCTCAACG TCGAGATCAT GGGCCGTGGC
TACGCCTGGC TCGACACCGG CACCCACGAC AGCCTGCTCG AAGCCGGCCA GTTCATCGCC
ACGCTCGAAA AGCGCCAGGG CCTGAAGGTG GCGTGCCTCG AAGAGATCGC CTACCGCGCC
GGCTGGATCG ACGCCACCCA GCTCGAGCGC CTGGCCCAGC CCCTGCTCAA GAACGGCTAC
GGCCAGTACC TGATGAAGGT ACTGCGCGAG CGCGCGTTCT GA
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| Protein sequence | MNRKGIILAG GSGTRLHPAT LAMSKQLLPV YDKPMVYYPL STLMLAGIRD ILLISTPQDT
PRFEHLLGDG SRWGLNISYC VQPSPDGLAQ AFILGRDFVG GAPSALVLGD NIYYGHDLQG
LLKSAADQPT GASVFAYHVT DPERYGVVDF DAHKRALSIE EKPAKPKSNY AVTGLYFYDN
QVCDIAASIQ PSPRGELEIT DVNAAYLKQG QLNVEIMGRG YAWLDTGTHD SLLEAGQFIA
TLEKRQGLKV ACLEEIAYRA GWIDATQLER LAQPLLKNGY GQYLMKVLRE RAF
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