| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0618 |
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| Symbol | |
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| ID | 6160101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 665820 |
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| End bp | 666941 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663368 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001789658 |
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| Protein GI | 171057309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0261116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGT TGTTCATTTC ATTTGTGGCA GCCTTTCTAG CCACGCTGGT CATCGTTCGC
TCCGCAAGAA GCCACGCCCG GTTCTCGGGT GACACCGATC AGAGCGGCCC CCAGAAATTC
CACGCCCGGG TGGTGCCACG CATCGGAGGC ATCGGCATCG CCTGTGGCGT CGCCGCAGGC
ATGCTCTACG CCATGAACCT GCCGGGCACG GATCAGTACA CGAAGAGCGT CCTGTGCATG
GCGGGCTTCA TCGCATTCAG TGCGGGCCTG ATCGAAGACT TCACGAAGCG CGTGACGCCG
CGCCAGCGCA TGCTGGCAAT GATTCTTGCC GCGGCCGTCG CCTTGTGGCT GGCAAACGCC
GAAATCGAAC GCACCGACAT CGCCGGCCTC GACCCGCTGC TGGGGATTGC AGGCGTCTCC
GTCCTGCTGA CACTGTTCGC AGTGGCCGGC GTGGCCAATT CGATCAACAT CATCGACGGC
TTCAACGGAC TCGCGTCGAT GTGCGTGGCG ATCATGCTGG CGGCGCTCGC GTTCGTGGCA
CATCAGGTCG GCGACACGCT GATCTTCAAC TGCGCCTTGA TCGGACTCGG TGCCGTGCTC
GGGTTCTTCG CGCTCAACTA CCCCTTCGGC CTGGTTTTCC TGGGCGATGG CGGCGCCTAC
TTCATGGGCT TCTGGGTGGC CGAGCTCAGC ATCATGTTGG TTCAGCGCAA CGACGCGGTT
TCGCCGATGT TCCCGCTGCT GCTGTGTGTC TACCCGATCT TCGAAACCGT GTTCACGATG
TACCGGCGCA AGATCGTGCG CGGTCACCCG ATGGGCCAGC CGGATGCCAC GCACCTGCAC
AGCCTGATCT ACCGCCGCCT GATGCGCTGG GCGGTCGGCA AGCGTGACGT GTCCACCCTG
CTGCGCCGCA ACTCGATGAC GTCGCCCTAC CTCTGGGCGC TGTGTTCGCT GGCTGCCGTG
CCTGCCACGC TGTGGTGGAA CGATTCGCAC GCCCTGCAGA TCTGCATCGT GCTTTTCTGC
CTGAGCTATC TGGCGCTCTA CCGCGCGATC GTGCGCTTCA GGACCCCCCG CCTGCTGGTT
CGCAAGGGCA CTTCAACCGC TGTTCTCAAG TCCGCGGGAT AA
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| Protein sequence | MTLLFISFVA AFLATLVIVR SARSHARFSG DTDQSGPQKF HARVVPRIGG IGIACGVAAG
MLYAMNLPGT DQYTKSVLCM AGFIAFSAGL IEDFTKRVTP RQRMLAMILA AAVALWLANA
EIERTDIAGL DPLLGIAGVS VLLTLFAVAG VANSINIIDG FNGLASMCVA IMLAALAFVA
HQVGDTLIFN CALIGLGAVL GFFALNYPFG LVFLGDGGAY FMGFWVAELS IMLVQRNDAV
SPMFPLLLCV YPIFETVFTM YRRKIVRGHP MGQPDATHLH SLIYRRLMRW AVGKRDVSTL
LRRNSMTSPY LWALCSLAAV PATLWWNDSH ALQICIVLFC LSYLALYRAI VRFRTPRLLV
RKGTSTAVLK SAG
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