Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0612 |
Symbol | |
ID | 6159859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 660781 |
End bp | 661872 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641663362 |
Product | putative glycerol-3-phosphate acyltransferase PlsX |
Protein accession | YP_001789652 |
Protein GI | 171057303 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000213414 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACGCC CTGTTCGCCT GTCGGTGGAC TGCATGGGTG GCGATCACGG TCCGTCGATC ACATTGCCGG CCTGCCGCAC CTTTCTCGAC AAGCATCCCG ATGCCGAACT GCTACTGGTC GGCAAGCCTG ATGCACTGAC TGCCGCGGCC TCATGGTCGC GCTGCCGCAT CGTGGCCGCG TCGGAGGTGG TCGAGATGGA CGATCCGATC GACATCGCGC TGCGCAAGAA GCGCGATTCG TCGATGCGGG TGGCCATCCA GCAGGTCAAG GCCGGCGACA CCCCGCCGGC AGCCGATGCC TGCGTGTCGG CCGGCAACAC CGGCGCCTTG ATGGCCGTGG CGCGCTACCT GCTGAAGACG CTCGACGGCA TCGATCGGCC CGCGATTGCC AGCGTGATGC CCAACACGCG AGATGGTTTC ACCACCATGC TCGACCTGGG CGCCAACGTC GATTGCACGG CCGAGCACCT GCTGCAGTTT GCCGTCATGG GCAGCGCCCT GGTGTCGGCG GTCGACGGCA AGGAGACCCC GACGGTCGGC CTGCTGAACA TCGGCGAAGA AGCCATCAAG GGCAGCGAGG TCATCAAGCG CGCCGGCGAA CTGCTGCGTG CGGCGGGTGA GTCGGGCCTG ATCAACTTCC GCGGCAACGT CGAAGGCAAC GACATCTTCA AGGGCACCAC CGACCTGGTG GTCTGCGACG GTTTCGTCGG CAACGTGGCA CTCAAGACGG CCGAAGGTCT GGCAACGATG TTGTCGACCT TCATCAAGCA GGAGTTCACG CGCACGCCCT ACGCCAAGCT CGCCGCGCTG GTGGCCCTGC CGGTCCTGAA ACATTTCAAG GATCGCGTCG ATCACCGCCG CTACAACGGC GCGGCCCTGC TCGGGTTGCG CGGCCTGGTG TTCAAGAGCC ACGGCTCGGC CGACGCACTG GCCTTCGAGA CGGCGCTCAC CCGCGCGTAT GATGCCGCCC GCAACGGGCT GCTCGAACGG GTGCATGAGC GCATCAACTT CGCCTTGCAG GCTTCGCTGA ACACAAACCC CGCGAATGCC AATCGAGCGG CCGAGGCCCC CGCACCGCGC CAAGCTGCAT GA
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Protein sequence | MQRPVRLSVD CMGGDHGPSI TLPACRTFLD KHPDAELLLV GKPDALTAAA SWSRCRIVAA SEVVEMDDPI DIALRKKRDS SMRVAIQQVK AGDTPPAADA CVSAGNTGAL MAVARYLLKT LDGIDRPAIA SVMPNTRDGF TTMLDLGANV DCTAEHLLQF AVMGSALVSA VDGKETPTVG LLNIGEEAIK GSEVIKRAGE LLRAAGESGL INFRGNVEGN DIFKGTTDLV VCDGFVGNVA LKTAEGLATM LSTFIKQEFT RTPYAKLAAL VALPVLKHFK DRVDHRRYNG AALLGLRGLV FKSHGSADAL AFETALTRAY DAARNGLLER VHERINFALQ ASLNTNPANA NRAAEAPAPR QAA
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