Gene Lcho_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0579 
Symbol 
ID6159949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp627834 
End bp628676 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content74% 
IMG OID641663328 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_001789619 
Protein GI171057270 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.257802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCGC CCGCGCCGAC GATCGGTCAG GCCCTGGCCC AGGCGCGCGA CGCCGGCCTG 
GCGCGGCTGG ACGCCCAGCT GCTGCTCGGC CACGTCTGCG GCCTCAGCCG CACCGGCCTG 
CTCACCAACG ACGATCAGGT GCTGCCCGCC GCCCAGCTGG CGCGCTGGCA ACAGCTGCTG 
GCGCGCCGAC TGGCCGGCGA GCCGGTGGCG TATCTGACCG GCCGGCACGA GTTCCACGGC 
CTGACCCTGC ACATCACGTC CGACGTGCTC GACCCGCGGC CCGACACCGA GACGCTGGTC 
GACTGGGGCC TGGAGCTGCT CGCACGGCTG GGCCGGCCGG CCCGCGTGCT CGACCTCGGC 
ACCGGCAGCG GCGCGATCGC GCTGGCGATC AAGCACCGCT GCCCGTCGGC GCAGGTCAGC 
GCGGTCGACT TCAGCGCGGC GGCGCTGGCG GTGGCAAGGG CCAACGGCGC GCGGCTGAAC 
CTCGACGTCG ACTGGCAGCC CGGCAACTGG TTCGAGAACC TGGCCGGCCA GCGCTTCGAC 
CTGATCCTGA GCAACCCGCC CTACATCGCC GAGGACGACC CGCACATGCC GGCGCTGCGA 
CACGAGCCGC GCCAGGCGCT GGTGTCCGGT GCCGACGGCC TGGACGACAT CCGCAGCCTC 
GTCAGGCAGG CGCCGCAGCA CCTCGTCGCC GGTGGCTGGC TGCTGCTCGA GCATGGCCAC 
GATCAGGGTG TGGCGGTGCA GGACCTGCTG CGCAGCACGG GCTATCGCGA GGTCGATCGG 
CGCCTCGATC TGGCCGACCA CGTCCGCTGC AGCGGCGGGC AGTGGCCAGC AGCGGGCAAC 
TGA
 
Protein sequence
MTSPAPTIGQ ALAQARDAGL ARLDAQLLLG HVCGLSRTGL LTNDDQVLPA AQLARWQQLL 
ARRLAGEPVA YLTGRHEFHG LTLHITSDVL DPRPDTETLV DWGLELLARL GRPARVLDLG 
TGSGAIALAI KHRCPSAQVS AVDFSAAALA VARANGARLN LDVDWQPGNW FENLAGQRFD 
LILSNPPYIA EDDPHMPALR HEPRQALVSG ADGLDDIRSL VRQAPQHLVA GGWLLLEHGH 
DQGVAVQDLL RSTGYREVDR RLDLADHVRC SGGQWPAAGN