Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0546 |
Symbol | |
ID | 6159810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 591740 |
End bp | 592495 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663295 |
Product | hypothetical protein |
Protein accession | YP_001789586 |
Protein GI | 171057237 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCATT ACGAGTACCC GTTGAACGAG ACCGTGCGCA CCCTGCTGCG GCTCGAGCAC CTGTTCGCCC GCATGGGCCA GCTGCTGGCG CGCGATGCGC CGCTGGACCA TCACTACACG CTGGCCACGC TGTTCGAGAT CATGGACGTG ACCTCGCGGG TCGATCTCAA GGTCGACCTG CTGCAGGAGC TCGACCGCCA GCGCCAGCAG CTCGCTGGCT ACCGCGGCAA CCCGTCGATC TCGGAGTCGG CGCTCGACAT GGCGATCCGC CGCATCGAGC TGGCGCACCA GCGGCTGAAC CACGTCGCCG GCAAGGCCGG CCAGGCGCTC ACCGCCAACG ACTGGCTGAT GAGCATCCGC AGCCGCATGA GCATCCCGGG CGGCACCTGC GAGTTCGACC TGCCGGCCTA TTTCGCCTGG CAGCAGGAGA GCGCCGCCCA CCGCCGCACC GACCTGCAGC GCTGGATCAG CACGCTCGAC CCGATGGCGC AGGCGCTGGC GGTGTGCCTG AGCCTGCTGC GCGAATCGGG CACGGTGCAG ACGGTGGCGG TGCGCGGCGG CCAGTTCCAG CAGAGCCTGG TCGGCAGTCG CAACTTCCAG CTCGCGCGCC TGCGCATTGC CCGCAGCCAC GCGCTGGTGC CCGAGATCAG CGGCAACCGC CTGCTGCTGG CCGTGCGCAT GATGCGGCCC GACGCCGAAT ACCGGCTCAA GCACGCCATC GTGGATTTCT CGATGGAGCT CACGCTCTGC GCCTGA
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Protein sequence | MIHYEYPLNE TVRTLLRLEH LFARMGQLLA RDAPLDHHYT LATLFEIMDV TSRVDLKVDL LQELDRQRQQ LAGYRGNPSI SESALDMAIR RIELAHQRLN HVAGKAGQAL TANDWLMSIR SRMSIPGGTC EFDLPAYFAW QQESAAHRRT DLQRWISTLD PMAQALAVCL SLLRESGTVQ TVAVRGGQFQ QSLVGSRNFQ LARLRIARSH ALVPEISGNR LLLAVRMMRP DAEYRLKHAI VDFSMELTLC A
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