Gene Lcho_0531 details

Gene Information

• Locus tag: Lcho_0531
• Symbol: ruvC
• ID: 6160748
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 578838
• End bp: 579389
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641663280
• Product: Holliday junction resolvase
• Protein accession: YP_001789571
• Protein GI: 171057222
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCGCA TCCTCGGCAT CGACCCCGGC CTGGCGACCA CCGGCTTCGG CGTGATCGAC 
GTCGAGGGCC AGGCGCTGCG TTACGTCGCC AGCGGCACGG TGCACACCCG CGAGGCCGAC 
ATCGGCGATC TGCCGGGGCG CATCAAGCTG ATCTTCGAGG GCGTGCGCGA GGTGATGGCG 
ACCTACCAGC CGACGTGTGC GTCGATCGAG ATCGTGTTCG TCAACGTCAA CCCGCAGAGC 
ACGCTGCTGC TCGGCCAGGC GCGCGGGGCG GCGCTGGCGG CGCTGGTGAC GGGCGGGCTG 
GCAGTGACCG AATACACCGC GCTGCAGATG AAGAAGGCCG TGGTCGGCAG CGGCCACGCG 
CGCAAGGAGC AGGTGCAGGA GATGGTGATG CGGCTGCTGC AGCTGCCCGG TCGGCCGAAC 
CAGGACGCCT CCGATGCGCT CGGCCTGGCG ATCACGCATG CCCATGCCGG CGGCTCGTTC 
GCGGCCATCG AGCAGGCCAC CACGCTGCAG CGCCGGCAGC ACGCCCACTA CCGGGGCGGC 
CGGATCTTTT GA 

 

Protein sequence

MTRILGIDPG LATTGFGVID VEGQALRYVA SGTVHTREAD IGDLPGRIKL IFEGVREVMA 
TYQPTCASIE IVFVNVNPQS TLLLGQARGA ALAALVTGGL AVTEYTALQM KKAVVGSGHA 
RKEQVQEMVM RLLQLPGRPN QDASDALGLA ITHAHAGGSF AAIEQATTLQ RRQHAHYRGG 
RIF