| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0499 |
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| Symbol | |
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| ID | 6161821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 540079 |
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| End bp | 541635 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663248 |
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| Product | histidine kinase |
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| Protein accession | YP_001789539 |
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| Protein GI | 171057190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00445235 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCGGCGC TGCCGGCGAT CGTGCGCCGC CGCGAGCAGC GTTCGCTGTT CGGCGAGATC
CTCGACTGGA TGCTCGCGCC GCTGCTGGTG ATCTGGCCGA TGAGCCTGGC GCTGACCTGG
CTGGCCGCGC AGGGCATCGC CAACAAGCCG TACGACCGCG CGCTGCTCGA ATCGGTGCGC
ACGCTGGCGC AGCGCATCGA GCCGGGCGAG CGCGGCATCC GTTTCGATCT GCCCAAGGAG
ACCGCCCGGC TGTTCCGGGC CGACGAGCTC GACAACGTCT ACTACCAGGT GCTGGGCACA
CGTGGCGAGT TCGTCAGCGG CGACCGCGAC CTGCCGGTGC CGCCCGACGG TGACGGCGGC
GTGCTCGGCG AGCCGCGCAT CCGCGACGAC GAGGTGCAGG ACGACAGCGT GCGGGTGGTC
TACGTCTGGG TGGCGGTGCC GGGGTCGAGC CGGCCGGCGC TGGTGCAGGT CGGCGAGACG
CTGACCAAGC GCTCGCGCCT GGCCACCGAG ATCATCAAGG GCGTGATCCT GCCGCAGTTC
GTGATCCTGC CGGTGGCGGT GCTGCTGGTG TGGTTTGCGC TCGCGCGCGG GCTGGCGCCG
CTCAACGCGC TGCAGCGGCG CATCCGCGAG CGCCACAGCG ACGACCTGTC GCCGATCGAC
GTGCACGACG TGCCCGAGGA GGTCTCGCCG CTGGTGCAGG CGTTCAACGA CCTGCTCGAA
CGTCAGCAGG GCTCGATGAG CACGCAGAAG CGCTTCCTGG CCGATGCCGC GCACCAGCTC
AAGACGCCGC TGGCGGGCCT GCGCATGCAG GCCGAACTGG CCGCCCGGGC GGTGGCCAGC
GGCAACGGCG ACGCGCGTGC GCTGCAGGCT TCGCTCGAAC ACATGGCCAA CGCCTCGCAG
CGTGCCGCAC ACATGGTCAA CCAGCTGCTG TCGATGGCCC GTGCCGATGC CCAGGCCGGC
ATCGCCGCAC GCGCGGTGCT CGACCTGCGC GTGCTGGCGA TCGACGTCGT GCGCGACTTC
GTGCCCAAGG CGCTCGACAA GGGCATCGAC CTCGGCTACG AAGGCCCCGA GCCGGTACCG
GACGACGCCT CCGAGGCCGA TACCGCGGCG GTCGACTGCC GCGTCCTCGG CCATCCGCTG
CTGCTGCGCG AGCTGATCGC CAACCTGGTC GACAACGCCC TGCAGTACAC GCCCACGCGT
GGCACCGTGA CCGTGCGGCT GCTGGTCGAT CCGTTCGGCC AGGTGGTGGT GCTGCAGGTC
GAGGACTCGG GGCCGGGCAT TCCGCAGGCC GAAAAGGATC TGGTGTTCCA GCCCTTCTAC
CGCGCGCTGG GCACGCCGGT GGACGGCTCG GGCCTGGGCC TGGCGATCGT GGCCGAGATC
GCGGCCCAGC ACGGCACCAC GATCGCGCTC GACGATGCCC GCAGCGGTGC GCAGATCCCG
CCGGGCGAGG GGCCGGGCGC GCGCTTCACG TTGCGCCTGC CGCGTGCCCA GCCCAGCCCG
CCGAGCGACG ATGCCGACCT GGCGCAGACG CAGACGCAGA CGCAGACGCA GGCCTGA
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| Protein sequence | MPALPAIVRR REQRSLFGEI LDWMLAPLLV IWPMSLALTW LAAQGIANKP YDRALLESVR
TLAQRIEPGE RGIRFDLPKE TARLFRADEL DNVYYQVLGT RGEFVSGDRD LPVPPDGDGG
VLGEPRIRDD EVQDDSVRVV YVWVAVPGSS RPALVQVGET LTKRSRLATE IIKGVILPQF
VILPVAVLLV WFALARGLAP LNALQRRIRE RHSDDLSPID VHDVPEEVSP LVQAFNDLLE
RQQGSMSTQK RFLADAAHQL KTPLAGLRMQ AELAARAVAS GNGDARALQA SLEHMANASQ
RAAHMVNQLL SMARADAQAG IAARAVLDLR VLAIDVVRDF VPKALDKGID LGYEGPEPVP
DDASEADTAA VDCRVLGHPL LLRELIANLV DNALQYTPTR GTVTVRLLVD PFGQVVVLQV
EDSGPGIPQA EKDLVFQPFY RALGTPVDGS GLGLAIVAEI AAQHGTTIAL DDARSGAQIP
PGEGPGARFT LRLPRAQPSP PSDDADLAQT QTQTQTQA
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