Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0468 |
Symbol | |
ID | 6160927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 507876 |
End bp | 508649 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663217 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001789508 |
Protein GI | 171057159 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCA ATCCCAAGCT CACCGACTGG CATGGCAAGG TGGTCTGGCT GGTGGGCGCG TCCAGCGGCA TCGGCCGCTC GACCGCCGAG CGGCTGGCCG AACGCGGTGC GCGCGTGGTG GTGTCGGCGC GCAACGTGCA GGCGCTGCAG CAGTTCACCG ACCGCTATCC GAAAAGCCTG GCGCTGCCGG TCGACGTCAC CGATCCCGGC GGCCTGGCCG GTGCGGCCGA TGCGCTGATG GCGCGCTGGG GTCGGCTCGA TCTGGTGGTC TATTGCGCCG GTCACTACCG CGCCCAGCGC GCCACCAGCT TCGATCTCGA CGAGATGCTG CGCCACGTGC AGATCAACTA CGTCGGCGCG CTGCACCTGC TCGACGTCGT GCTGCCGATC CTGCTGAACC AGCGCAGCGG CCACATCAGC CTGATCTCGA GCGTGGCGGG TTACCGCGGC CTGCCGCAGG GCCTGGCCTA CGGGCCGACC AAGGCGGCGC TGCACAACCT GGCCGAGACG CTCTACATGG ACCTGCGTGA TCGGGGCGTG GCGGTGTCGG TGATCAACCC GGGTTTCGTC GAGACGCCGC TGACGGCGCA CAACGAGTTC CGCATGCCCG CGCTGATCTC GCCGCTGGCG GCGGCCGACG CGATGCTCAA GGGCTGGGCG CGCGGCGAGT TCGAGATCCA CTTTCCCAAG CGCTTCACGC GCATCCTCAA GCTGCTGGGC TGGCTGCCGC AGGGCCTGTA CTTTGCCGCG GTGCGCCGCG CCACTGGCCT GTGA
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Protein sequence | MSLNPKLTDW HGKVVWLVGA SSGIGRSTAE RLAERGARVV VSARNVQALQ QFTDRYPKSL ALPVDVTDPG GLAGAADALM ARWGRLDLVV YCAGHYRAQR ATSFDLDEML RHVQINYVGA LHLLDVVLPI LLNQRSGHIS LISSVAGYRG LPQGLAYGPT KAALHNLAET LYMDLRDRGV AVSVINPGFV ETPLTAHNEF RMPALISPLA AADAMLKGWA RGEFEIHFPK RFTRILKLLG WLPQGLYFAA VRRATGL
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