Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0393 |
Symbol | engB |
ID | 6164014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 433690 |
End bp | 434487 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663142 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_001789433 |
Protein GI | 171057084 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0694387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCC CCAACCCAGC TCCCACCCAA GGTGGCGCGG ACGCCACGCG CGCCGCCCTT TCCTGGGCTC ACACGGCGCG TTTCCTGACC ACGGCGAGCC GCCTCGACCA GCTGCCGGCG CACGATCTGC CCGAGATCGC CTTCGTCGGC CGCTCCAACG CCGGCAAGTC GACCGCGATC AACACGCTGG CACAGCAACG CCAGCTCGCC TTCGCGTCCA AGAAGCCGGG CCGCACCCAG CACATCAACC TGTTCGAGCT CGGCCCCAAG GACGCGCCCA GCGCGCTCTG GGCCGACCTG CCCGGCTACG GCTACGCGGC GGTCGAGCGT GCCGCCAAGC TGCGCTGGCA GGCCGTGATG GCCGACTACC TGAAGATGCG CCGCAACCTC GCGGGCGTGG TGCAGATGAT CGACTCGCGC CACGGCTTCA CCGCGCTCGA CCGCCAGCTG CTCGAATTCG TCGGCCCGCG CGTGGTGACC GGCGAGGTCA AGCTGCTGGT GCTGCTGACC AAGGCCGACA AGCTCAACCG CAAGGAGGCC AGCGCGGCGC TGCGTTCGGC GCAGGATTTC CTGGCCGACC TGTCGACCGA CCAGTCGGAT CTGTCGGTGA CGCTGTTCTC CGCGCTCAAG CGCCAGGGTG TCGAGGACGT GGCGCAGACC CTGCACGACT GGCGCGACGC GTCGGCCGCG CCGATCGAGG GCGGCCTGCT GGCCGCGAGC GCAGCCCTGC GGGCCGAACG CTTCGAGACG CCGGATGACG TCGTCATCCC GGCCGACCCG GCCGAACCCG CCGCCTGA
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Protein sequence | MMTPNPAPTQ GGADATRAAL SWAHTARFLT TASRLDQLPA HDLPEIAFVG RSNAGKSTAI NTLAQQRQLA FASKKPGRTQ HINLFELGPK DAPSALWADL PGYGYAAVER AAKLRWQAVM ADYLKMRRNL AGVVQMIDSR HGFTALDRQL LEFVGPRVVT GEVKLLVLLT KADKLNRKEA SAALRSAQDF LADLSTDQSD LSVTLFSALK RQGVEDVAQT LHDWRDASAA PIEGGLLAAS AALRAERFET PDDVVIPADP AEPAA
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