| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0359 |
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| Symbol | |
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| ID | 6163662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 391574 |
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| End bp | 393883 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663108 |
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| Product | malic enzyme |
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| Protein accession | YP_001789399 |
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| Protein GI | 171057050 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0112485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCC TCACTCCCGC CGAACAGGCC CTGCGCGACG CTGCGCTCGA ATATCACCGC
TCGCCGGTGC GCGGCAAGAT CGCCGTCACG CCGCTCAAGC CGCTGATGAA CCAGCGCGAC
CTGTCGCTGG CCTATTCGCC GGGTGTCGCC TACGCCTGCC TGGCGATCCA GGACGATCCG
TCGCTGGCGG CCGAATACAC CTCGCGCGCC AACCTGGTCG GCGTGGTCAC CAACGGCACC
GCGGTGCTGG GCCTGGGCGA CATCGGCCCG CTGGCGGGCA AGCCGGTGAT GGAAGGCAAG
GGCTGCCTGT TCAAGAAGTT CGCCGGCATC GACGTGTTCG ACATCGAGCT GGCCGAGCGC
GACCCCGACA AGCTGGTCGA CATCATCGCC GCGCTGGAGC CGACGCTGGG CGGTGTCAAC
CTCGAGGACA TCAAGGCGCC CGAGTGCTTC TACATCGAGA AGAAGCTGCG CGAGCGCATG
AAGATCCCGG TCTTCCACGA CGACCAGCAC GGCACCGCGA TCATCTCGGG CGCGGCGCTG
CTCAACGGGC TGGAGCTGGT CGGCAAGCCG ATCGGCGACG TCAAGCTGGT GGTGTCGGGC
GCGGGTGCGG CGGCGATCGC CTGCCTCGAC CTGATGGTCG GCCTGGGCGT TCGACTCGAG
AACATCTACG TCTGCGACTC CAAGGGCGTG ATCCGCGAGG GCCGCGCCGA CGTGCAGGCC
GGCAAGCTCG ATGAATCGAA GCAGCGTTAC TGCCAGCGCA CCAACGCGGC CACGCTGGCC
GACGTGATCC GCGGCGCCGA CGTGTTCCTG GGCTGCTCGG CGCCGGGCGT GCTGACGCAG
GACATGGTGG CCACGATGGG CGACAAGCCC ATCATCCTGG CGCTGGCCAA CCCCGAGCCG
GAGATCCGCC CCGAGCTGGC GCGCGCCGCC AAGCCCGACT GCATCATGGC GACCGGCCGT
TCTGACTACC CGAACCAGGT CAACAACGTC CTGTGTTTCC CGTACATCTT CCGGGGTGCA
CTCGACTGCG GCGCCACCAC CATCAACGAG GCGATGAAGC TGGCCTGCGT GCGCGAGATC
GCCGCGCTGG CCAAGGAAGA AACCAGCGAC GAGGTGGCCG CCGCCTACGC CGGCCAGGAG
CTGCAGTTCG GGCCCGAGTA CATCATCCCC AAGCCCTTCG ACGTGCGGCT GATCCTGCGC
ATCGCGCCGG CGGTGGCGAA GGCAGCGGCC GACTCGGGCG TGGCGGCGCG GCCGATCGCC
GACCTGGAGG CCTACCGCGA GTCGCTGACC CGCTACGTCT ACCAGACCGG CATGTTCATG
CGCCCGGTGT TCGCCGCCGC CAAGCGCGCG CCGGCCCGGG TGGTCTACGC CGAAGGCGAG
GACGAGCGCG TGCTGCGCGC GGTCCAGGTG GTGCTGGCCG AGGGCCTGGC CAAGCCGATC
CTGGTCGGCC GGCCGAACGT GATCCAGATG CGCATCGAAC GCGCCGGCCT GCGCCTGAAG
GCCGGTGTCG ATTTCGAGGT GGTCGATCCG GAAGACGATC CGCGTTTCCG CGCCTGCTGG
GAGGAGTACC ACCGCGTGAT GGGCCGCGAG GGCGTGTCGG TCGAGGCCGC CAAGGCGGCG
GTGCGGCGCT CGACCACGCT GATCTCGGCG CTGCTGCTCA AGCGCGGCGA CGCCGACGCG
ATGCTGTGCG GCCTGCACGG CCGCTACGAC AGCCACTTCG AGCACGTCAA GGCGGTGATC
GGTGCGCGCC CCTGCACCCG CGTGATGGGC ACGATGAACG CGCTGATGCT CGAGGAGCAC
AACCTCTTCA TCACCGACAC CTTCATCAAC GAGGAGCCGA GTGCCGAGGA ACTGGCCGAG
ATCGCCCGGA TGGCGGCCGA GGAAGTGCGC CGCTTCGGCG TGCCGCCGAA GGTGGCGTTC
CTGTCGCACT CGGTGTTCGG CTCGTCGAAC CGGGCGTCGG CCAGGCGCAT GCGCCTGGCG
CGCGACCTGT TCGTGGCGCG CTGCCCCGAG ATCGAATGCG ACGGCGAGAT GCACGGCGAT
GCCGCGCTGT CCGAGAAGAT CCGCCGCCAG GTGCTGCCCG AGACCACGCT CACCGGCTCG
GCCAACGTGC TGGTGCTGCC CAACATCGAC GCGGCCAACA TCCTGTTCAA CGTGCTGAAG
GTGACCTCCG GCCACGGCGT GACGATCGGC CCGATCCTGC TCGGCGCGGC CGCGCCGGTG
CACGTGCTGA CGCCGTCGGC GACGATGCGG CGGGTGGTCA ACATGACCGC GCTGGCGGTG
GCCGACGCCG CTGCGCTGCG TCGTTCGTAA
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| Protein sequence | MPALTPAEQA LRDAALEYHR SPVRGKIAVT PLKPLMNQRD LSLAYSPGVA YACLAIQDDP
SLAAEYTSRA NLVGVVTNGT AVLGLGDIGP LAGKPVMEGK GCLFKKFAGI DVFDIELAER
DPDKLVDIIA ALEPTLGGVN LEDIKAPECF YIEKKLRERM KIPVFHDDQH GTAIISGAAL
LNGLELVGKP IGDVKLVVSG AGAAAIACLD LMVGLGVRLE NIYVCDSKGV IREGRADVQA
GKLDESKQRY CQRTNAATLA DVIRGADVFL GCSAPGVLTQ DMVATMGDKP IILALANPEP
EIRPELARAA KPDCIMATGR SDYPNQVNNV LCFPYIFRGA LDCGATTINE AMKLACVREI
AALAKEETSD EVAAAYAGQE LQFGPEYIIP KPFDVRLILR IAPAVAKAAA DSGVAARPIA
DLEAYRESLT RYVYQTGMFM RPVFAAAKRA PARVVYAEGE DERVLRAVQV VLAEGLAKPI
LVGRPNVIQM RIERAGLRLK AGVDFEVVDP EDDPRFRACW EEYHRVMGRE GVSVEAAKAA
VRRSTTLISA LLLKRGDADA MLCGLHGRYD SHFEHVKAVI GARPCTRVMG TMNALMLEEH
NLFITDTFIN EEPSAEELAE IARMAAEEVR RFGVPPKVAF LSHSVFGSSN RASARRMRLA
RDLFVARCPE IECDGEMHGD AALSEKIRRQ VLPETTLTGS ANVLVLPNID AANILFNVLK
VTSGHGVTIG PILLGAAAPV HVLTPSATMR RVVNMTALAV ADAAALRRS
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