| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0351 |
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| Symbol | |
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| ID | 6162821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 385976 |
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| End bp | 386944 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663100 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_001789391 |
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| Protein GI | 171057042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.227981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTC TGCGGGTCGC GTTTGCCGGC ACGCCGGAGT TCGCGCGTGC CGCCCTGGCG
CGCATCCATG CAGCCGGCCA CGACGTGCCG CTGGTGCTGA CGCAGCCCGA CCGGCCGGCC
GGTCGTGGCA TGAAGCTGCA GGCCTCGCCG GTCAAGCAGC TGGCGCTCGA TCTCGGTGTG
CCGGTCGCCC AGCCCATGAG CCTGCGGCTC GACGGCAAGT ACCCGGCCGA GGCGGCGGCT
GCGCAGGCTG CGCTGCTGGC GGCGCAGATC GACGTGATGG TGGTGGCCGC CTACGGCCTG
ATCCTGCCGG CCTGGGTGCT CGAACTGCCA CGCCTGGGCT GCCTGAACAT CCACGCCTCG
CTGCTGCCGC GCTGGCGCGG CGCGGCGCCG ATCCACCGCG CCATCGAGGC CGGTGACACG
CAGACCGGCA TCACGCTGAT GCAGATGGAC CAGGGCCTCG ACACCGGCGC GATGCTGCTG
ACCGCCGTCG AGCCGATCGG CCCGGCCGAC ACCACCGCGA GCCTGCACGA CCGGCTCGCC
GTGCTGGGCG CCGAGCTGGT GCTGCAGGCG CTCGACGCCG CGGCCGCCGG CACCTTGCAG
CCGGTGGTGC AGCCGCTCGA AGGCGTGACC TACGCCCACA AGATCGACAA GCGCGAGGCG
CCGATCGACT GGTCGCTGCC GGCGGCCGTG ATCGAGCGTC GGGTGCGTGC CTTCGATCCG
TTTCCCGGCG CCACCTTCAG CCTGGGCGGC GACACGCTCA AGCTCTGGTC GGCGCAGGTG
GTCGACCTGC CGGCCGGTCA CGGTCATGCC GCCGGCGAGG TGATCTCGAC CGAGGGCGGC
ACGCCGCTCG TCGCCTGCGG CGAGGGCGCC CTGGCCTTGA CGCAATTGCA ACGGGCCGGC
GGCAAGCGGC TGAGCGGGCG CGACTATCTG CAGGCCCGGC CGGTCGTGGT CGGCGTGCGG
GCCGGTTGA
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| Protein sequence | MTSLRVAFAG TPEFARAALA RIHAAGHDVP LVLTQPDRPA GRGMKLQASP VKQLALDLGV
PVAQPMSLRL DGKYPAEAAA AQAALLAAQI DVMVVAAYGL ILPAWVLELP RLGCLNIHAS
LLPRWRGAAP IHRAIEAGDT QTGITLMQMD QGLDTGAMLL TAVEPIGPAD TTASLHDRLA
VLGAELVLQA LDAAAAGTLQ PVVQPLEGVT YAHKIDKREA PIDWSLPAAV IERRVRAFDP
FPGATFSLGG DTLKLWSAQV VDLPAGHGHA AGEVISTEGG TPLVACGEGA LALTQLQRAG
GKRLSGRDYL QARPVVVGVR AG
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