| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0329 |
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| Symbol | |
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| ID | 6160381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 355539 |
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| End bp | 356930 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663078 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001789369 |
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| Protein GI | 171057020 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA GCGTCTTCGA CCTCTTCAAG ATCGGCATCG GGCCGTCGAG TTCACACACC
GTGGGGCCGA TGCGGGCGGC GCGGCTGTTC GTGCAGCGGC TCGACCAGCA GCGCCAGCTC
GAACAGGTGG CGCGCGTCGA GGCCCGGCTC TACGGCTCGC TCGGCGCCAC GGGCAAGGGT
CACGGCAGCG ACAAGGCGGT GCTGCTCGGG CTGCTCGGCG AGGAGCCCGA GTCGGTCGAC
ATCGAGGCCG TCCCGGCCAC GCTGGCGCTG ATCCGCAGCA GCGGCCAGTT GCGGCTGGCC
GGGCGCCACG CCGTCGGCTT CGTCGAGAAG GAGCACCTGA CCTTCTACCG CCGCGAGACC
CTGCCCTTTC ATGCCAACGG CATGAAGCTC GAAGCCTTCG ACGCCGCGGG CGCGCGGATC
GAGAGCCGCA TCTACTACTC GGTGGGCGGC GGCTTCGTGG TCAGCGACGA GGTGGCCGCC
GACGGCACGC GGCACCAGGC CATCGCGCCC GACAGCACCG TGCTGCCGCT GCCGTTTCAC
AGCGGCGCCG AGTTGCTGGC GCTGACGCAA ACGCATGGCT GCAGCATCGC CGAGGTGATG
CGCCGCAACG AGCGCCATTG GCGCACGGAC GCCGAGATCG ACGCCGGCCT GTTGCGCATC
TGGCAGGTGA TGCAGGACTG CGTGCGGCGC GGCTGCGCCA CCGAGGGCAC GCTGCCGGGC
GGCTTCAAGG TCAAGCGCCG CGCCGCCGAG CTGTATCGCC ATCTGACCAG CCATCCCGAG
GCCGCGCTGC GCGATCCGCT GCAGGTGCTC GACTGGGTCA ACCTCTACGC GCTGGCAGTC
AACGAAGAAA ACGCCGCCGG TGGCCGCGTG GTGACCGCGC CGACCAACGG CGCGGCCGGC
ATCGTGCCGG CGGTGCTTCA TTACTACTCA CGTTTCCAGC ACGGCGCCAA CGACGCCGGG
GTGATCGAGT TCCTGCTCAC CGCCGCCGCG ATCGGCCTGC TCTACAAGGA AAACGCCAGC
ATCAGCGGCG CCGAGGTCGG CTGCCAGGGC GAGGTCGGCG TGGCCTGCTC GATGGCCGCC
GGCGCGCTGT GCGCGGTGCT CGGCGGCACG CCGGCGCAGG TCGAGAACGC CGCCGAGATC
GGCATGGAGC ACCACCTCGG CCTGACCTGC GATCCCGTCG GCGGGCTGGT GCAGATCCCG
TGCATCGAGC GCAACGCCGT CGCCTCGGTG CAGGCGCTCA ACGCCGCGCG CATGGCGCTG
CGCGGCGACG GCACGCACTT CGTCAGCCTC GACAAGGTCA TCAAGACCAT GCGCGAGACC
GGCGCCGACA TGCAGAGCAA GTACAAGGAA ACCGCCCGCG GCGGGCTGGC GGTGAACATC
GTCGAGTGCT GA
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| Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAARLF VQRLDQQRQL EQVARVEARL YGSLGATGKG
HGSDKAVLLG LLGEEPESVD IEAVPATLAL IRSSGQLRLA GRHAVGFVEK EHLTFYRRET
LPFHANGMKL EAFDAAGARI ESRIYYSVGG GFVVSDEVAA DGTRHQAIAP DSTVLPLPFH
SGAELLALTQ THGCSIAEVM RRNERHWRTD AEIDAGLLRI WQVMQDCVRR GCATEGTLPG
GFKVKRRAAE LYRHLTSHPE AALRDPLQVL DWVNLYALAV NEENAAGGRV VTAPTNGAAG
IVPAVLHYYS RFQHGANDAG VIEFLLTAAA IGLLYKENAS ISGAEVGCQG EVGVACSMAA
GALCAVLGGT PAQVENAAEI GMEHHLGLTC DPVGGLVQIP CIERNAVASV QALNAARMAL
RGDGTHFVSL DKVIKTMRET GADMQSKYKE TARGGLAVNI VEC
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