| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0302 |
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| Symbol | |
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| ID | 6161499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 319917 |
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| End bp | 320825 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663046 |
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| Product | patatin |
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| Protein accession | YP_001789342 |
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| Protein GI | 171056993 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCC GCTCCCTGTT GTCCCTCGCC GCTGTCGCCT TGTTGTTGAC CGCCTGTGCC
TCGGCGCCGC CGGTGGCCGT CAAGCCGCCG CCGTTGCCGC GCATCGGCCT GGCGCTGGGC
GGTGGTGCCG CCAAAGGCTT CGCCCATGTC GGCGTGATCA AGGTGCTGGA AGCCGCCGGG
CTGACGCCCA CCGTGGTGGC CGGCACCAGC GCCGGCAGCG TGGTCGGGGC GCTCTACGCC
TCGGGCTTGA GCGGTTTTGC GCTGCAGGAG CAGTCGTTTG CGCTCGACGA GGAGCGCATC
AAGGACCTGA CGCTGTTCGG CGTCGGCGGC GTGATCAAGG GCGACAAGCT GCAGGCCTAT
GTCAACGAGC TGATCAAGAA CAAGCCGCTG GAGCAGATGA GCAAGCCGTT CGCGGCGGTG
GCCACCGACC TCGACAGCGG CGAGCGGGTG ATCTTCACGC GTGGGAACAC CGGCCAGGCG
GTCCGCGCCT CGTGCAGTGT GCCGGGGGTG TTCCAGCCGG CGCTGATCGG CGGCAAGCGT
TATGTCGACG GTGGCCTGGT CAGCCCGGTG CCGGTGGACG CGGCGCGCCA GCTCGGCGCC
GACATCGTCA TCGCGGTCGA CATCTCGTCG AAGGCGCGCG ACGGCAAGGC GGCCGGCATG
CTCAGCAACC TGAACCAGAC CATCACGATC ATGGGCCAGA AGCTCGGCGA GCAGGAGATG
ACACGCGCCG AGGTGGTGAT CCGCCCGCGT GTGGGCCAGA TCGGCGCGAC CGATCTCGAC
CAGAAACACG TGGCGGTGCT CGAAGGCGAA AAGGCCGCCC AGGCCGCGCT GCCGCAGATC
CGCGCAGCGA TCGAGCGCTG GCAGCAGGCC CAGCTGGCGC GGGACGCGGC CACGGCCGTC
AGGCGCTGA
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| Protein sequence | MHRRSLLSLA AVALLLTACA SAPPVAVKPP PLPRIGLALG GGAAKGFAHV GVIKVLEAAG
LTPTVVAGTS AGSVVGALYA SGLSGFALQE QSFALDEERI KDLTLFGVGG VIKGDKLQAY
VNELIKNKPL EQMSKPFAAV ATDLDSGERV IFTRGNTGQA VRASCSVPGV FQPALIGGKR
YVDGGLVSPV PVDAARQLGA DIVIAVDISS KARDGKAAGM LSNLNQTITI MGQKLGEQEM
TRAEVVIRPR VGQIGATDLD QKHVAVLEGE KAAQAALPQI RAAIERWQQA QLARDAATAV
RR
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