| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0275 |
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| Symbol | |
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| ID | 6163968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 290209 |
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| End bp | 291537 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663019 |
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| Product | histidine kinase |
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| Protein accession | YP_001789315 |
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| Protein GI | 171056966 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.395189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTTCCA TCCGCACGCG ACTGCTGGTC GGCCTGCTGC TGCTGATCGC GCTGGCCGCA
GGTGCGTTTG CCGCGCTGAC CTACCGCCAG GTGCGGGCCG AGAGCGAGGC GCTGTTCGAC
TACCAGCTGC GCCAGATGGC GCTGTCGCTG CGTGACCAGG GCGAGATCGC GCCCGAGCAG
GCCGGCGCGC TGGCCGAGGA GGATTTCGAT TTCGTGGTGC AGATCTGGAG CGCCGACGGC
CGCAGCATCT ACGCCTCGCG CCTGCACACC GATCTGCCGG CGCGTGCGCT GCTCGGGCTG
GCCGAGATCC GCGCCGGCGA CCAGCTCTGG CGCACCTACA GCGTCGCCAC CCGCACCCGC
GTGATCCAGG TGGCGCAACC GGTGCGCGTG CGCCAGCGGC TGGCGGCCGA CGCGGCGCTG
CGCAGCGTCA CGCCGCTGCT GCTGCTGGCG CCGCTGCTGG CACTGGCGCT CGGCGTGCTG
GCCACCTGGG CGCTGCGGCC GCTGCAGCAG TTGGCGGCCG GCTTGCGGCA GCGCGATGCC
GCGTCGCTCG CGCCGCTGCC CGCCGACGGC CTGCCCGATG AACTGGCGCC GCTGGCACGC
GCGCTCAACG AGCTGCTGCA ACGCGTGGGC GGCTCGCTCG ACACCCAGCG CGCCTTCGTC
GCCGACGCCG CGCACGAGCT GCGCTCGCCG CTGACGGCGC TGAAACTCCA GCTCCACCTG
CTGCAGCGCG CCGGCAACGA CGGCGACCGC GACGAGGCCA TCGCCACTCT GCGCGCCGGC
ATCGAGCGCG CCGTGCGGCT GGTCGAGCAG CTGCTCGCGC TGGCGCGCAG CGAGCCCGGC
GCGCCGCCGG TCGAACCCAG CGAGCTCGAC CTGTGCGACA TCGCCCGCCA GGCGCTCGCC
CACAACGAGG CGCTCGCGCG CTCGCGCGGC AGCCGTGTCG AGAGCGATCT GCCGGCGCAG
GCGGTGACGG TGTCCGGCGA CCCGGCCGCG CTGCTGGCGC TGGCGCGCAA CCTAGTCGAC
AACGCGTTGC GCTACAGCCC CGAGGGCGCG CAGGTGCGCA TCAGCGTGCA TATGCAAGAC
GGCCGGCCGG TGCTCGAAGT CGACGACAGC GGCCCCGGCA TCCCGGCCGC CGAGCGCGAG
CGGGTGTTCC AGCGCTTCGT GCGCGGCGCC GCCAGCAGCA GCGAATCGGG CAGCGGCCTG
GGCCTGGCGA TCGTGCGGCA GGTGGCGCAG CGGCATGGCG CGACGCTCAC TTTGGACGAT
TCGCCGCTCG GCGGGCTGCG GGTGACGCTG AGGTTTCCCG AGCCGGCGGT CGCCCCGGCC
TCGACCTGA
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| Protein sequence | MTSIRTRLLV GLLLLIALAA GAFAALTYRQ VRAESEALFD YQLRQMALSL RDQGEIAPEQ
AGALAEEDFD FVVQIWSADG RSIYASRLHT DLPARALLGL AEIRAGDQLW RTYSVATRTR
VIQVAQPVRV RQRLAADAAL RSVTPLLLLA PLLALALGVL ATWALRPLQQ LAAGLRQRDA
ASLAPLPADG LPDELAPLAR ALNELLQRVG GSLDTQRAFV ADAAHELRSP LTALKLQLHL
LQRAGNDGDR DEAIATLRAG IERAVRLVEQ LLALARSEPG APPVEPSELD LCDIARQALA
HNEALARSRG SRVESDLPAQ AVTVSGDPAA LLALARNLVD NALRYSPEGA QVRISVHMQD
GRPVLEVDDS GPGIPAAERE RVFQRFVRGA ASSSESGSGL GLAIVRQVAQ RHGATLTLDD
SPLGGLRVTL RFPEPAVAPA ST
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