Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0266 |
Symbol | |
ID | 6160511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 281825 |
End bp | 282622 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663010 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001789306 |
Protein GI | 171056957 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0235599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGC CCTACGAAAA CATCCTCGTC GAAACCCGCA CCGGCGCGGG CTCGATGAAC TACGGCTGGA TCGCGCTGAA CCGCCCCAAG GCGCTCAACG CGCTCAACGA TCCGCTGATG GACGAACTCG GCGCCGCGCT GCTGGCCTTC GAGGCCGACG ACCGCATCGC CTGCATCGTG CTGACCGGCA GCGAGAAGGC GTTTGCCGCC GGTGCCGACA TCGCCATGAT GGCGCCGTTC AACTTTGCCA ACGCCTACCG CAAGGGCCTG ATCTCGCGCA ACTGGGACAC CCTGCGCCAG GTGCGCAAGC CGGTGATCGC CGCGGTGGCG GGCTTTGCGC TGGGCGGCGG CTGCGAGGTG GCGATGGCCT GCGACCTGAT CATCGCCGCC GACAACGCCC GCTTCGGCCA GCCCGAGGTC AAGCTCGGCA TCATCCCCGG CGCCGGTGGC ACGCAGCGCC TGCCGCGTGC GGTCGGCAAG AGCAAGGCGA TGGACCTGGC GCTGACCGGC CGCATGATGG ACGCCGCCGA GGCCGAACGC GCCGGGCTGG TCTCGCGGGT GGTGCCGGCC GCCGATCTGC ACGCTGAAGC CGACAAGATC GCCCAGACGC TGTGCGGCTA CTCGACCCTG ACGCTGATGG CGATCAAGGA GAGCGTCAAC CGCGCCTACG AGGCGCCGCT GTCGGAGGGC CTGCTGTTCG AGCGCCGGCT GTTCCACGCG CTGTTCTCGA GCAACGACCA GAAGGAAGGC ATGGGCGCCT TCCTCGAGAA GCGCCCGCCG AGCTTCACGC ACGACTGA
|
Protein sequence | MSTPYENILV ETRTGAGSMN YGWIALNRPK ALNALNDPLM DELGAALLAF EADDRIACIV LTGSEKAFAA GADIAMMAPF NFANAYRKGL ISRNWDTLRQ VRKPVIAAVA GFALGGGCEV AMACDLIIAA DNARFGQPEV KLGIIPGAGG TQRLPRAVGK SKAMDLALTG RMMDAAEAER AGLVSRVVPA ADLHAEADKI AQTLCGYSTL TLMAIKESVN RAYEAPLSEG LLFERRLFHA LFSSNDQKEG MGAFLEKRPP SFTHD
|
| |