Gene Lcho_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0261 
Symbol 
ID6160580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp276698 
End bp277339 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641663005 
ProductDSBA oxidoreductase 
Protein accessionYP_001789301 
Protein GI171056952 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0132035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ATGTGGTCTC CGACGTGGTG TGCCCCTGGT GTGCGGTCGG CGTTTCGTCG 
CTGCTGCGGG CGCTCGACAC GCTGGGCGAC GAGTTGCGGC CGACGCTGCA TTTCCAGCCC 
TTCGAGCTCA ACCCGACGCT CGGGCCGGGC GGGCAGGACA TCGTCGAGTA CCTCGGCCGC 
AAGTACGGCT CGACGCCCGA GCAGATCGAG CGCACCCACG AGCAGATCGC GCAGCGCGGC 
GCGGCGGTGG GCTTCACGTT CAACATGGAC CTGCGCACGC GCACCTACAA CAGCTTCGAC 
GCGCACCGCC TGCTGCACTG GGCCGGGCTG GAGGGCGAGG ACTTCCAGCT GCTGCTCAAG 
CTGGCGCTGC TGCGCAGCTA TTTCACCGAG GGGCTCGACC CCGGCGAGCC GGCGCTGCTG 
GTGAGCCTGG CGGCCGAGGC GGGGCTCGAT GCGGCGCGTG CGCTCGACAT CCTGGCCAGC 
GACGAATACG CCGACGAGGT GCGCGAGCGC GAGGCGTTCT ACCAGTCGCA GGGCATCGCG 
TCGGTGCCGT CGTTCATCAT CAACGACCGC CACCTGATCG CCGGTGGCCA GCCGCCCGAG 
TTCTTCGTGC AGGCGCTGCG CCAGATCGCC GAAGAAGGCT GA
 
Protein sequence
MKIDVVSDVV CPWCAVGVSS LLRALDTLGD ELRPTLHFQP FELNPTLGPG GQDIVEYLGR 
KYGSTPEQIE RTHEQIAQRG AAVGFTFNMD LRTRTYNSFD AHRLLHWAGL EGEDFQLLLK 
LALLRSYFTE GLDPGEPALL VSLAAEAGLD AARALDILAS DEYADEVRER EAFYQSQGIA 
SVPSFIINDR HLIAGGQPPE FFVQALRQIA EEG