Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0254 |
Symbol | |
ID | 6160530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 270367 |
End bp | 271176 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641662998 |
Product | cytochrome c oxidase subunit II |
Protein accession | YP_001789294 |
Protein GI | 171056945 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00721127 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCTGT CCATCGCCCT GATCGTCATC GTCGTCGGCT CGGTGCTGTT CCACCTGCTG AGCCCGTGGT GGACGCAGCC GCTGGCGTCG AACTGGCAGC GCATGGACGA CACGCTGACC ATCACGCTGC TGATCACCGG CGCGTTTTTC GTGGTGATCC ACGCGGTGGT CATCTACGCC ATCCTGCGCT GGCGCCACCG CGCCGGCCGG GGCCAGGCGC GCGCCGCCTA CACGCCCGAC GACCACCGGC TCGAACGCTG GCTGATCGGC ATCACCACGG TCGGCATCGT CGCGCTGCTG GCGCCCGGCC TGGTGGTCTA TGCCGACTAC GTGCGCCCAC CCGCCGATGC GCTCAAGGTC GAGGTGGTCG GCCAGCAGTG GCGCTGGCGT TATCGGTTTG CAGGCGAGGA CGGCCTGCTC GGCCGCAGCG ACATCCGCCA CGTCAGCGCC GACAACCCCT TCGGCCTCGA CCCCGCCGAT GCACGCGGCC ACGGCGACGT GCTGATCGAC GACAACGAGC TGCACCTGCC GCTGGCGCGC CCGGTGCAGC TGCAACTGCG CTCCAACGAC GTGCTGCACG ACTTCTTCGT GCCGCCGTTT CGCGCCCGCA TGAACATCGT GCCGGGCAGC GTCACCACCT TCTGGTTCAC GCCCACGCAG ACCGGGCGTT TCGAGCTGAT GTGCGCGCAG CTGTGCGGCA TCGGCCACCA CCTGATGCGC GGCGTCGTGG TGGTCGAGGA CGAGGCGGCC TTCCAGGCCT GGCTGGCTGC GCAGCCCCGC TACGCCGCAG CCACCGGCGG CAAGCCCTGA
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Protein sequence | MALSIALIVI VVGSVLFHLL SPWWTQPLAS NWQRMDDTLT ITLLITGAFF VVIHAVVIYA ILRWRHRAGR GQARAAYTPD DHRLERWLIG ITTVGIVALL APGLVVYADY VRPPADALKV EVVGQQWRWR YRFAGEDGLL GRSDIRHVSA DNPFGLDPAD ARGHGDVLID DNELHLPLAR PVQLQLRSND VLHDFFVPPF RARMNIVPGS VTTFWFTPTQ TGRFELMCAQ LCGIGHHLMR GVVVVEDEAA FQAWLAAQPR YAAATGGKP
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