| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0232 |
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| Symbol | |
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| ID | 6162756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 248341 |
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| End bp | 248832 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641662976 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789272 |
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| Protein GI | 171056923 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00129925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACT CCTCCCCGAT TCCGACCCCG CCGCGCCCCG GCCGGCCGCC GCGCGTGGTG
CTCGAGACCT CCGTGGTGAT CTCGGCGCTG ATGTTCGGCG GCGGCGCGGG AGCGCAGCTG
CGGCGGGCCT GGCAGGAGGG CTACTGCCGC CCGCTGCTGT GCAAGGCCAC CGTGCTCGAC
CTGACCCGAT CGCTGGCGAG CCCGCAGCTC GGCTTGAGCC GCCACGAGCA GGAACAGCTG
CTGGGCGACT ACCTGCCGCA CGCCCTGAAG GTGCGGGTGC CCGAGGCCAG CGGGCCGGCG
CCGGCCGACG AGCCCGCGGC GCTCGCCTTC GTGCGCCTGG CGATGGCCGG CCGCGCCCAT
GTGCTGGTCA GCGGCGACGT CGGGCTGCTG GCCATGCAGG GCCGGCTGAG CTGCCGGGTG
ATGGCGCTCG AGCCCTTCCT GAACCACATC GCCAGCGCCG GCATCCGGCC GCTGGCATTG
CGGCCGCGCT GA
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| Protein sequence | MSHSSPIPTP PRPGRPPRVV LETSVVISAL MFGGGAGAQL RRAWQEGYCR PLLCKATVLD
LTRSLASPQL GLSRHEQEQL LGDYLPHALK VRVPEASGPA PADEPAALAF VRLAMAGRAH
VLVSGDVGLL AMQGRLSCRV MALEPFLNHI ASAGIRPLAL RPR
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