| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0213 |
|---|
| Symbol | |
|---|
| ID | 6161305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 224521 |
|---|
| End bp | 225285 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641662957 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001789253 |
|---|
| Protein GI | 171056904 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0954935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATC TCCGTTCCTT CCTGTACCTG CTGTTCCTGA TCGTGACGGT GATGCCGTGG
GCGATCGTCG CGGTGGTGGC GTCGATCGGG GTGCGCGGCA CGCCGCTCTA CTGGCTGTGC
ACCGGCTGGC TGCGGCTGGC GATCTGGGGT GCGCGCCGGA TCTGCGGCGT GCAGTACCGC
GTGCAGGGCC TGGAGAACGT GCCGAGCGCG GCCAACGGCC GGGCCGCCGT GATCCTGGTG
CCCAAGCACC AGTCGACCTG GGAGACCTTC GCCTTCCCGG CCATCATGCC GCACCCGCTG
GCCTACGTCT TCAAGCGCGA GCTGCTCTAC ATCCCGTTCT TCGGCTGGGC CATCGCCCGG
CTCGACATGG TGCACATCAA CCGCGCCCGG CAGTCCGAAG CCTGGCGCAA GGTGGTCGAG
CAGGGCACGC AGATCATGGC CGGCGGCACC TGGATGATCA TGTTCCCCGA AGGCACCCGC
ACCCCGCGTG GCAGCCAGGG CGCCTACAAG ACCGGCGCCT CGCGCCTGGC CGTGGCCACC
GGCACGCCGC TGGTGCCGAT CGCCGTGACC TCGGCACGCT GCTGGCCGCG CAAGAGCTTC
CTGCTGCGCC CGGGCGTGAT CGACGTGTCA ATCGGCAAAC CGATCGAGCC GGCCGGGCGC
CGCCCCGACG ACCTGATGCG CGAGGTCGAA GCCTGGATCG AAGGCGAGAT GCGCCGGCTC
GATCCCGAGG CCTATCCCCC CCATGAAGCG CCGGCCAGCC CCTGA
|
|---|
| Protein sequence | MIYLRSFLYL LFLIVTVMPW AIVAVVASIG VRGTPLYWLC TGWLRLAIWG ARRICGVQYR
VQGLENVPSA ANGRAAVILV PKHQSTWETF AFPAIMPHPL AYVFKRELLY IPFFGWAIAR
LDMVHINRAR QSEAWRKVVE QGTQIMAGGT WMIMFPEGTR TPRGSQGAYK TGASRLAVAT
GTPLVPIAVT SARCWPRKSF LLRPGVIDVS IGKPIEPAGR RPDDLMREVE AWIEGEMRRL
DPEAYPPHEA PASP
|
|---|
| |