Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0209 |
Symbol | |
ID | 6161301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 219487 |
End bp | 220488 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641662953 |
Product | ABC transporter-related protein |
Protein accession | YP_001789249 |
Protein GI | 171056900 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.110043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAC GCACCGATCT GGAACTGATC GACCTGGTCA AGGACTACGG CCAGTCGCTC GCCGTGGCCG GCATCAACCT GAAGATCGCC GCCGGCAGCT ACTGCTGCCT GCTCGGCCCT TCGGGTTGCG GCAAGACCTC GACGCTGCGC ATGATTGCCG GCCACGAGGA GCCGACCGAA GGCCAGATCG CCCTGGGCGG GCGCGAGATC ACGCACCTGA GCCCTGCCGC ACGCGGCACG GCGATGATGT TCCAGAGCTA TGCGCTGTTC CCGCACCTGA CGGTGCTGGA GAACGTGGCG TTCAGCGCCC GCATGAAGGG TGTGGCGCGC GCCGAGCGCG AGGCCCGCGC CCACGAGCTG CTGCAGCTGG TGGCGATGGA CCCGTACGCG GCGCGCCTGC CCGCCGCGCT GTCGGGCGGC CAGCAGCAGC GCGTGGCGCT GGCGCGCGCG CTGATGATGC GGCCCAAGGT GCTGCTGCTC GACGAGCCGC TGTCGGCGCT CGATCCGTTC CTGCGCGTGA AGATGCGCGC CGAGCTCAAG CGCTGGCATC AGAGCCTGGG CATGAGCTTC GTGCACGTCA CGCACAGCCA GGAAGAGGCG ATGGCGCTGG CCGATCTGGT GGTGGTGATG AACCACGGCC GCATCGAGCA GGCCGGCAGC GCGCGCGAGG TCTTCGAGCG CCCGCGCACC GAATTCGTGG CGCGCTTCAT CGGCGCGCAC AACATCATCG ACACGCCCGC CGGCAAGGTG GCGGTGCGCT GCGACCGGCT CAATCTGGTC GAGCCCGATG CCGGCGAAAC GGTGGTCACG GTGGCCGCGG TCGAGTACCA GGGCGCGCAG GTGCAGGTGC ACCTGATGGC CGAGTCGGCC GCTGACGCCG AAGACGCCGA GCGCTGGACC GCCACCCTGT CCGACGCCAG CTTCCACGCC GCGCCGATGG CGCCCGGCCA CCGGGTGGCG ATGCGCTGGT GGGCCGCCGA CGCCCACGCG CTGGCGGCCT GA
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Protein sequence | MSTRTDLELI DLVKDYGQSL AVAGINLKIA AGSYCCLLGP SGCGKTSTLR MIAGHEEPTE GQIALGGREI THLSPAARGT AMMFQSYALF PHLTVLENVA FSARMKGVAR AEREARAHEL LQLVAMDPYA ARLPAALSGG QQQRVALARA LMMRPKVLLL DEPLSALDPF LRVKMRAELK RWHQSLGMSF VHVTHSQEEA MALADLVVVM NHGRIEQAGS AREVFERPRT EFVARFIGAH NIIDTPAGKV AVRCDRLNLV EPDAGETVVT VAAVEYQGAQ VQVHLMAESA ADAEDAERWT ATLSDASFHA APMAPGHRVA MRWWAADAHA LAA
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