Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0199 |
Symbol | |
ID | 6161408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 207900 |
End bp | 209822 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641662943 |
Product | putative serine protein kinase, PrkA |
Protein accession | YP_001789239 |
Protein GI | 171056890 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2766] Putative Ser protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.392588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGA TCAGCAACTT CGCCGCTCGC TACGAGCGCA CCAAAGAAGA GGAACTCACG CTGGAGGAGT ACCTTGCCGA GTGCAAGCGC AACCCTCTGG CATACGCCAC GGCCCCCGAG CGCATGCTCA AGGCCATCGG TGAGCCGCAG ATGGTCGACA CCCGCAACGA CCCGCGGCTG TCGCGCATCT TTGCCAACAA GGTCATCAAG ATCTACCCGG CCTTCGCCGA GTTCTACGGC ATGGAAGAGG CCATCGAGCA GGTGGTCAGC TACTTCCGCC ATGCCGCTCA GGGCCTGGAG GAAAAGAAGC AGATCCTGTA TCTGCTGGGC CCGGTCGGGG GTGGCAAGAG CTCGATCGCC GAGCGCCTGA AACTGCTGAT GCAGGAGGTG CCGTTCTACG CCGTCAAGGG CTCGCCGGTG AACGAGTCGC CGCTCGGGCT GTTCGACAAC GACGAAGACG GACCGGTGCT CGAGAAGGAA TACGGCATCC CGCGGCGCTA CCTCACGCGG ATCATGAGCC CGTGGGCGGT CAAGCGGCTG GAGGAATACG GCGGCGACAT CCGGCGCTTC AAGGTGGTCC GGCGCTACCC GAGCATCCTC AAGCAGGTCG GCATTTCCAA GACCGAGCCG GGTGACGAGA ACAACCAGGA CATCAGCTCG CTGGTCGGCA AGGTCGACAT CCGCAAGCTC GAGACCTACG CGCAGGACGA CCCGGACGCC TACAGCTACT CCGGCGGCCT GTGCCTGGCC AACCAGGGCC TGCTCGAGTT CGTCGAGATG TTCAAGGCGC CGATCAAGGT GCTGCACCCG CTGCTGACGG CCACGCAGGA GTCCAACTTC AAGGGCACCG AAGGCTTCGG CGCGATCCCG TTCGACGGCA TCGTGCTGGC GCACAGCAAC GAGAGCGAGT GGAAGGCGTT CCGCAACAAC AAGAACAACG AGGCCTTCCT CGACCGGATC TACATCGTCA AGGTGCCGTA CTGCCTGCGC GTGAGCGAGG AAGTGAAGAT CTACGAGAAG CTGCTCAAGG GCAGCTCGCT GGCCGGCGCC ACCTGCGCAC CGGGCACGCT GAAGATGATG AGCCAGTTCG CCATCCTGAC CCGCCTGAAG GAGCCCGAGA ACTCGAGCCT CTACAGCAAG ATGATGGTCT ACGACGGCGA GAACCTGAAG GACACCGACC CGCGCGCCAA GAGCTACCAG GAGTACCGCG ACTACGCCGG CGTCGACGAG GGCATGAGCG GCATCAGCAC GCGTTTCGCC TACAAGATCA TCTCCAAGGT CTTCAACTTC GACAGCCAGG AGATCGCCGC CAACCCGGTG CACCTGATGT ACGTGCTGGA GCAGCAGATC GAGCGTGAGC AGTTCCCGGC CGAGCTCGAG CAGAAGTACG TCGCCTACAT CAAGGAGCTG CTGGCGCCGC GTTACGCCGA GTTCATCGGC AAGGAGATCC AGACCGCCTA CCTGGAGAGC TACAGCGAAT ACGGCCAGAA CATCTTCGAC CGCTACGTCA CCTACGCCGA CTACTGGATC CAGGACCAGG AATACCGCGA CACCGACACC GGCGAGGTGT TCGACCGCGG CTCGCTGAAC GGTGAACTCG AGAAGATCGA GAAGCCCGCC GGCATCGCCA ACCCGAAGGA CTTCCGCAAC GAGATCGTCA ACTTCGTGCT GCGTGCCCGG GCCAACAACC AGGGCAAGAA TCCGGTCTGG ACCAGCTACG AGAAGCTGCG CGTGGTGATC GAGAAGAAGA TGTTCTCCAA CACCGAGGAA CTGCTGCCCG TCATCAGCTT CAACGCCAAG GCCAGCGCAG ACGAGGCCAA GAAGCACGAG GACTTCGTCA ACCGCATGGT CAACAAGGGC TACACCGGCA AGCAGGTGCG GCTGCTGTGC GAGTGGTATC TGCGGGTGCG CAAGTCCAGC TGA
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Protein sequence | MDVISNFAAR YERTKEEELT LEEYLAECKR NPLAYATAPE RMLKAIGEPQ MVDTRNDPRL SRIFANKVIK IYPAFAEFYG MEEAIEQVVS YFRHAAQGLE EKKQILYLLG PVGGGKSSIA ERLKLLMQEV PFYAVKGSPV NESPLGLFDN DEDGPVLEKE YGIPRRYLTR IMSPWAVKRL EEYGGDIRRF KVVRRYPSIL KQVGISKTEP GDENNQDISS LVGKVDIRKL ETYAQDDPDA YSYSGGLCLA NQGLLEFVEM FKAPIKVLHP LLTATQESNF KGTEGFGAIP FDGIVLAHSN ESEWKAFRNN KNNEAFLDRI YIVKVPYCLR VSEEVKIYEK LLKGSSLAGA TCAPGTLKMM SQFAILTRLK EPENSSLYSK MMVYDGENLK DTDPRAKSYQ EYRDYAGVDE GMSGISTRFA YKIISKVFNF DSQEIAANPV HLMYVLEQQI EREQFPAELE QKYVAYIKEL LAPRYAEFIG KEIQTAYLES YSEYGQNIFD RYVTYADYWI QDQEYRDTDT GEVFDRGSLN GELEKIEKPA GIANPKDFRN EIVNFVLRAR ANNQGKNPVW TSYEKLRVVI EKKMFSNTEE LLPVISFNAK ASADEAKKHE DFVNRMVNKG YTGKQVRLLC EWYLRVRKSS
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